RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ARHGEF1Q92888 912 aaKnown RBP14.81□□□□□ -0.04
SCN9A-204ENST00000452182 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
SCN9A-204ENST00000452182 BCORQ6W2J9 1755 aa14.81□□□□□ -0.04
SCN9A-204ENST00000452182 PNPLA7Q6ZV29 1317 aa14.81□□□□□ -0.04
SCN9A-204ENST00000452182 COPS6Q7L5N1 327 aa14.81□□□□□ -0.04
SCN9A-204ENST00000452182 PHAXQ9H814 394 aaKnown RBP14.81□□□□□ -0.04
SCN9A-204ENST00000452182 SCN7AQ01118 1682 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 PTPRCP08575 1304 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 KIF16BQ96L93 1317 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 FLIIQ13045 1269 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 DZIP3Q86Y13 1208 aaKnown RBP14.8□□□□□ -0.04
SCN9A-204ENST00000452182 XAGE3Q8WTP9 111 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 BCL2L13Q9BXK5 485 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
SCN9A-204ENST00000452182 ZNF330Q9Y3S2 320 aaPredicted RBP14.8□□□□□ -0.04
SCN9A-204ENST00000452182 ERVV-1B6SEH8 477 aa14.79□□□□□ -0.04
SCN9A-204ENST00000452182 BCAR3O75815 825 aa14.79□□□□□ -0.04
SCN9A-204ENST00000452182 PHF14O94880 888 aa14.79□□□□□ -0.04
SCN9A-204ENST00000452182 RFC4P35249 363 aa14.79□□□□□ -0.04
SCN9A-204ENST00000452182 G2E3Q7L622 706 aa14.79□□□□□ -0.04
SCN9A-204ENST00000452182 MAP3K15Q6ZN16 1313 aa14.78□□□□□ -0.04
SCN9A-204ENST00000452182 USP42Q9H9J4 1324 aaKnown RBP14.78□□□□□ -0.04
SCN9A-204ENST00000452182 DDX58O95786 925 aaKnown RBP14.78□□□□□ -0.04
SCN9A-204ENST00000452182 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
SCN9A-204ENST00000452182 TTLL7Q6ZT98 887 aa14.78□□□□□ -0.04
SCN9A-204ENST00000452182 ANKRD13DQ6ZTN6 518 aa14.78□□□□□ -0.04
SCN9A-204ENST00000452182 COL23A1Q86Y22 540 aaPredicted RBP14.78□□□□□ -0.04
SCN9A-204ENST00000452182 PLBD2Q8NHP8 589 aa14.78□□□□□ -0.04
SCN9A-204ENST00000452182 ARHGAP45Q92619 1136 aa14.78□□□□□ -0.04
SCN9A-204ENST00000452182 CAMTA2O94983 1202 aa14.77□□□□□ -0.04
SCN9A-204ENST00000452182 AIMP1Q12904 312 aaKnown RBP14.77□□□□□ -0.04
SCN9A-204ENST00000452182 SMIM5Q71RC9 77 aa14.77□□□□□ -0.04
SCN9A-204ENST00000452182 TBC1D2BQ9UPU7 963 aa14.77□□□□□ -0.04
SCN9A-204ENST00000452182 NUP98P52948 1817 aa14.77□□□□□ -0.04
SCN9A-204ENST00000452182 CASZ1Q86V15 1759 aa14.77□□□□□ -0.04
SCN9A-204ENST00000452182 ARFGEF2Q9Y6D5 1785 aa14.77□□□□□ -0.04
SCN9A-204ENST00000452182 ZPR1O75312 459 aa14.77□□□□□ -0.05
SCN9A-204ENST00000452182 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.05
SCN9A-204ENST00000452182 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.05
SCN9A-204ENST00000452182 KSR2Q6VAB6 950 aa14.77□□□□□ -0.05
SCN9A-204ENST00000452182 IPO8O15397 1037 aaKnown RBP14.76□□□□□ -0.05
SCN9A-204ENST00000452182 SLC16A10Q8TF71 515 aa14.76□□□□□ -0.05
SCN9A-204ENST00000452182 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
SCN9A-204ENST00000452182 ADCY9O60503 1353 aa14.75□□□□□ -0.05
SCN9A-204ENST00000452182 GIGYF2Q6Y7W6 1299 aaKnown RBP14.75□□□□□ -0.05
SCN9A-204ENST00000452182 ARXQ96QS3 562 aa14.75□□□□□ -0.05
SCN9A-204ENST00000452182 ZNF652Q9Y2D9 606 aa14.75□□□□□ -0.05
SCN9A-204ENST00000452182 ANKRD36CQ5JPF3 1778 aa14.75□□□□□ -0.05
SCN9A-204ENST00000452182 PI4KAP2A4QPH2 592 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 GYS1P13807 737 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
SCN9A-204ENST00000452182 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 RIC3Q7Z5B4 369 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 PI4KAP1Q8N8J0 262 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
SCN9A-204ENST00000452182 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 BCL2L12Q9HB09 334 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 ATP10DQ9P241 1426 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
SCN9A-204ENST00000452182 HLFQ16534 295 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 HSP90AB3PQ58FF7 597 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 SRP68Q9UHB9 627 aaKnown RBP14.74□□□□□ -0.05
SCN9A-204ENST00000452182 MAP3K2Q9Y2U5 619 aa14.74□□□□□ -0.05
SCN9A-204ENST00000452182 PXDNLA1KZ92 1463 aa14.73□□□□□ -0.05
SCN9A-204ENST00000452182 COL24A1Q17RW2 1714 aa14.73□□□□□ -0.05
SCN9A-204ENST00000452182 ATF7IPQ6VMQ6 1270 aa14.73□□□□□ -0.05
SCN9A-204ENST00000452182 NLGN1Q8N2Q7 840 aa14.73□□□□□ -0.05
SCN9A-204ENST00000452182 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
SCN9A-204ENST00000452182 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
SCN9A-204ENST00000452182 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
SCN9A-204ENST00000452182 N4BP2Q86UW6 1770 aaPredicted RBP14.73□□□□□ -0.05
SCN9A-204ENST00000452182 TRIM27P14373 513 aa14.72□□□□□ -0.05
SCN9A-204ENST00000452182 TCIRG1Q13488 830 aa14.72□□□□□ -0.05
SCN9A-204ENST00000452182 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
SCN9A-204ENST00000452182 FRAT1Q92837 279 aaPredicted RBP14.72□□□□□ -0.05
SCN9A-204ENST00000452182 TRIM28Q13263 835 aaKnown RBP14.71□□□□□ -0.05
SCN9A-204ENST00000452182 PDGFDQ9GZP0 370 aaPredicted RBP14.71□□□□□ -0.05
SCN9A-204ENST00000452182 IBTKQ9P2D0 1353 aaPredicted RBP14.71□□□□□ -0.05
SCN9A-204ENST00000452182 RNF123Q5XPI4 1314 aa14.71□□□□□ -0.06
SCN9A-204ENST00000452182 MS4A1P11836 297 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 NEXNQ0ZGT2 675 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 ISCA1Q9BUE6 129 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 ABCC4O15439 1325 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 PSDA5PKW4 1024 aaPredicted RBP14.7□□□□□ -0.06
SCN9A-204ENST00000452182 F6X3S4 739 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 TM4SF1P30408 202 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 LINS1Q8NG48 757 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 MTFR1LQ9H019 292 aa14.7□□□□□ -0.06
SCN9A-204ENST00000452182 BEND3Q5T5X7 828 aa14.69□□□□□ -0.06
SCN9A-204ENST00000452182 TBC1D9BQ66K14 1250 aa14.69□□□□□ -0.06
SCN9A-204ENST00000452182 MYD88Q99836 296 aa14.69□□□□□ -0.06
SCN9A-204ENST00000452182 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
SCN9A-204ENST00000452182 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
SCN9A-204ENST00000452182 IGKV5-2P06315 115 aa14.68□□□□□ -0.06
SCN9A-204ENST00000452182 RRP1P56182 461 aaKnown RBP14.68□□□□□ -0.06
SCN9A-204ENST00000452182 PDE3AQ14432 1141 aa14.68□□□□□ -0.06
SCN9A-204ENST00000452182 NFIXQ14938 502 aa14.68□□□□□ -0.06
SCN9A-204ENST00000452182 PARP10Q53GL7 1025 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms