RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RGS12O14924 1447 aa10.21□□□□□ -0.78
LSM5-208ENST00000450169 PTCH1Q13635 1447 aa10.21□□□□□ -0.78
LSM5-208ENST00000450169 USP27XA6NNY8 438 aa10.21□□□□□ -0.78
LSM5-208ENST00000450169 ZNF75DP51815 510 aa10.21□□□□□ -0.78
LSM5-208ENST00000450169 PLA2G4DQ86XP0 818 aa10.21□□□□□ -0.78
LSM5-208ENST00000450169 ATP7AQ04656 1500 aa10.21□□□□□ -0.78
LSM5-208ENST00000450169 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
LSM5-208ENST00000450169 MCCP23508 829 aa10.2□□□□□ -0.78
LSM5-208ENST00000450169 SRLQ86TD4 932 aa10.2□□□□□ -0.78
LSM5-208ENST00000450169 ARHGAP45Q92619 1136 aa10.2□□□□□ -0.78
LSM5-208ENST00000450169 SMARCE1Q969G3 411 aa10.2□□□□□ -0.78
LSM5-208ENST00000450169 ZNF428Q96B54 188 aa10.2□□□□□ -0.78
LSM5-208ENST00000450169 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
LSM5-208ENST00000450169 ST5P78524 1137 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 ERCC6LQ2NKX8 1250 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 BCCIPQ9P287 314 aaKnown RBP eCLIP10.19□□□□□ -0.78
LSM5-208ENST00000450169 CLIP2Q9UDT6 1046 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 KCNG1Q9UIX4 513 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 RRP15Q9Y3B9 282 aaKnown RBP10.19□□□□□ -0.78
LSM5-208ENST00000450169 JRKLQ9Y4A0 524 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 ATP6V1DQ9Y5K8 247 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 MRVI1Q9Y6F6 885 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 ABCC4O15439 1325 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 A0A1B0GUL7 405 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 TOMM22Q9NS69 142 aa10.19□□□□□ -0.78
LSM5-208ENST00000450169 PTPRTO14522 1441 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 ZRANB2O95218 330 aaKnown RBP eCLIP10.18□□□□□ -0.78
LSM5-208ENST00000450169 ANAPC15P60006 121 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 CACNB1Q02641 598 aaPredicted RBP10.18□□□□□ -0.78
LSM5-208ENST00000450169 TYRO3Q06418 890 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 CCDC144BQ3MJ40 725 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
LSM5-208ENST00000450169 CT47A1Q5JQC4 288 aaPredicted RBP10.18□□□□□ -0.78
LSM5-208ENST00000450169 CCDC144CPQ8IYA2 1237 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 GOLGA5Q8TBA6 731 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 PALD1Q9ULE6 856 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 EXOC6BQ9Y2D4 811 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 NEMFO60524 1076 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 TMCO3Q6UWJ1 677 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 LRRC8AQ8IWT6 810 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 CBX8Q9HC52 389 aa10.18□□□□□ -0.78
LSM5-208ENST00000450169 ARGLU1Q9NWB6 273 aaPredicted RBP10.18□□□□□ -0.78
LSM5-208ENST00000450169 KIDINS220Q9ULH0 1771 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 KIF2AO00139 706 aaPredicted RBP10.17□□□□□ -0.78
LSM5-208ENST00000450169 DPYSL4O14531 572 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 STX6O43752 255 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 F13A1P00488 732 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 TTC31Q49AM3 519 aaPredicted RBP10.17□□□□□ -0.78
LSM5-208ENST00000450169 MRPL50Q8N5N7 158 aaKnown RBP10.17□□□□□ -0.78
LSM5-208ENST00000450169 BANK1Q8NDB2 785 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 FBXO18Q8NFZ0 1043 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 L2HGDHQ9H9P8 463 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 CEP83Q9Y592 693 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 ELP1O95163 1332 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 KNDC1Q76NI1 1749 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 KIAA1210Q9ULL0 1709 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 USP32Q8NFA0 1604 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 CCDC172P0C7W6 258 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 SKILP12757 684 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 ARHGAP29Q52LW3 1261 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.17□□□□□ -0.78
LSM5-208ENST00000450169 DRC1Q96MC2 740 aa10.17□□□□□ -0.78
LSM5-208ENST00000450169 UPF3BQ9BZI7 483 aaKnown RBP10.17□□□□□ -0.78
LSM5-208ENST00000450169 CDC25BP30305 580 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 ANO6Q4KMQ2 910 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 FILIP1Q7Z7B0 1213 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 CNPY4Q8N129 248 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 TDRD7Q8NHU6 1098 aaKnown RBP10.16□□□□□ -0.78
LSM5-208ENST00000450169 NUP62CLQ9H1M0 184 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 AATKQ6ZMQ8 1374 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 GPR37O15354 613 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 ATP2B1P20020 1258 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 SYT1P21579 422 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 OAS2P29728 719 aaKnown RBP10.16□□□□□ -0.78
LSM5-208ENST00000450169 EP400NLQ6ZTU2 488 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 CCAR2Q8N163 923 aaKnown RBP10.16□□□□□ -0.78
LSM5-208ENST00000450169 NECTIN2Q92692 538 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 UBXN6Q9BZV1 441 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 DEF6Q9H4E7 631 aa10.16□□□□□ -0.78
LSM5-208ENST00000450169 TRMT1Q9NXH9 659 aaKnown RBP10.16□□□□□ -0.78
LSM5-208ENST00000450169 MROH1Q8NDA8 1641 aa10.15□□□□□ -0.78
LSM5-208ENST00000450169 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
LSM5-208ENST00000450169 CAMK4Q16566 473 aa10.15□□□□□ -0.78
LSM5-208ENST00000450169 TSGA10IPQ3SY00 556 aa10.15□□□□□ -0.78
LSM5-208ENST00000450169 PACS2Q86VP3 889 aa10.15□□□□□ -0.78
LSM5-208ENST00000450169 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.78
LSM5-208ENST00000450169 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 ATP8B1O43520 1251 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 MAGEA9P43362 315 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 IQUBQ8NA54 791 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 LRRN4CLQ8ND94 238 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 SLC12A5Q9H2X9 1139 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 FAM135BQ49AJ0 1406 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 CASTP20810 708 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms