RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
SNRNP27-203ENST00000450162 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
SNRNP27-203ENST00000450162 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
SNRNP27-203ENST00000450162 HYPKQ9NX55 129 aa16.87■□□□□ 0.29
SNRNP27-203ENST00000450162 TGFB2P61812 414 aa16.86■□□□□ 0.29
SNRNP27-203ENST00000450162 DDR1Q08345 913 aa16.86■□□□□ 0.29
SNRNP27-203ENST00000450162 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
SNRNP27-203ENST00000450162 MAP3K15Q6ZN16 1313 aa16.86■□□□□ 0.29
SNRNP27-203ENST00000450162 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
SNRNP27-203ENST00000450162 SERPINB2P05120 415 aa16.85■□□□□ 0.29
SNRNP27-203ENST00000450162 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
SNRNP27-203ENST00000450162 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
SNRNP27-203ENST00000450162 CARMIL3Q8ND23 1372 aa16.85■□□□□ 0.29
SNRNP27-203ENST00000450162 E9PSI1 815 aa16.84■□□□□ 0.29
SNRNP27-203ENST00000450162 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
SNRNP27-203ENST00000450162 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
SNRNP27-203ENST00000450162 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
SNRNP27-203ENST00000450162 SCN7AQ01118 1682 aa16.83■□□□□ 0.28
SNRNP27-203ENST00000450162 PROSER3Q2NL68 480 aa16.83■□□□□ 0.28
SNRNP27-203ENST00000450162 GIGYF2Q6Y7W6 1299 aaKnown RBP16.83■□□□□ 0.28
SNRNP27-203ENST00000450162 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
SNRNP27-203ENST00000450162 TTLL7Q6ZT98 887 aa16.83■□□□□ 0.28
SNRNP27-203ENST00000450162 COPS6Q7L5N1 327 aa16.83■□□□□ 0.28
SNRNP27-203ENST00000450162 C10orf71Q711Q0 1435 aa16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 TSPYL6Q8N831 410 aa16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 NIP7Q9Y221 180 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNRNP27-203ENST00000450162 ANXA1P04083 346 aa16.81■□□□□ 0.28
SNRNP27-203ENST00000450162 HLFQ16534 295 aa16.81■□□□□ 0.28
SNRNP27-203ENST00000450162 TPTE2Q6XPS3 522 aa16.81■□□□□ 0.28
SNRNP27-203ENST00000450162 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
SNRNP27-203ENST00000450162 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
SNRNP27-203ENST00000450162 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
SNRNP27-203ENST00000450162 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 PARP10Q53GL7 1025 aa16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 PLBD2Q8NHP8 589 aa16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
SNRNP27-203ENST00000450162 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 NPHP1O15259 732 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 VAMP4O75379 141 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 ST5P78524 1137 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 SLFN5Q08AF3 891 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 NBPF5PQ86XG9 351 aaPredicted RBP16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 ZNF34Q8IZ26 560 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 CNBD1Q8NA66 436 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 BRIP1Q9BX63 1249 aa16.79■□□□□ 0.28
SNRNP27-203ENST00000450162 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
SNRNP27-203ENST00000450162 PDE6BP35913 854 aa16.78■□□□□ 0.28
SNRNP27-203ENST00000450162 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
SNRNP27-203ENST00000450162 NRXN2Q9P2S2 1712 aa16.77■□□□□ 0.28
SNRNP27-203ENST00000450162 GRIN3BO60391 1043 aa16.77■□□□□ 0.28
SNRNP27-203ENST00000450162 TCIRG1Q13488 830 aa16.77■□□□□ 0.28
SNRNP27-203ENST00000450162 GPR162Q16538 588 aa16.77■□□□□ 0.28
SNRNP27-203ENST00000450162 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.28
SNRNP27-203ENST00000450162 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
SNRNP27-203ENST00000450162 KIF13BQ9NQT8 1826 aa16.77■□□□□ 0.27
SNRNP27-203ENST00000450162 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.27
SNRNP27-203ENST00000450162 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
SNRNP27-203ENST00000450162 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
SNRNP27-203ENST00000450162 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
SNRNP27-203ENST00000450162 PXDNLA1KZ92 1463 aa16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 H0YIN7 160 aa16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 DPEP1P16444 411 aa16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 RIC3Q7Z5B4 369 aa16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 TRMT2AQ8IZ69 625 aaKnown RBP16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 PIM2Q9P1W9 311 aa16.75■□□□□ 0.27
SNRNP27-203ENST00000450162 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
SNRNP27-203ENST00000450162 KCNA3P22001 575 aa16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 GPTP24298 496 aa16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 HNRNPUQ00839 825 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 UTP14AQ9BVJ6 771 aaKnown RBP16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 NUP98P52948 1817 aa16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
SNRNP27-203ENST00000450162 UBN2Q6ZU65 1347 aa16.72■□□□□ 0.27
SNRNP27-203ENST00000450162 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
SNRNP27-203ENST00000450162 SUSD4Q5VX71 490 aa16.72■□□□□ 0.27
SNRNP27-203ENST00000450162 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
SNRNP27-203ENST00000450162 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
SNRNP27-203ENST00000450162 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
SNRNP27-203ENST00000450162 DALRD3Q5D0E6 543 aaKnown RBP16.71■□□□□ 0.27
SNRNP27-203ENST00000450162 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
SNRNP27-203ENST00000450162 ISCA1Q9BUE6 129 aa16.71■□□□□ 0.27
SNRNP27-203ENST00000450162 FAM177BA6PVY3 158 aa16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 NTSR2O95665 410 aa16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 CHRNA5P30532 468 aa16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 FLIIQ13045 1269 aa16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 SLC10A5Q5PT55 438 aa16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 METTL22Q9BUU2 404 aaPredicted RBP16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 RIC1Q4ADV7 1423 aa16.7■□□□□ 0.26
SNRNP27-203ENST00000450162 PI4KAP2A4QPH2 592 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms