RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 PXDNLA1KZ92 1463 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 ZNF500O60304 480 aaPredicted RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 ZNF830Q96NB3 372 aaPredicted RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 VPS37CA5D8V6 355 aaPredicted RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 TTC14Q96N46 770 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 ARID3AQ99856 593 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.23
SYVN1-204ENST00000449943 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 ADCK5Q3MIX3 580 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 AACSQ86V21 672 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 LRRC37A3O60309 1634 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 UQCRHLA0A096LP55 91 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 NPHP1O15259 732 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 UQCRHP07919 91 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
SYVN1-204ENST00000449943 GJB2P29033 226 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 DNTTIP2Q5QJE6 756 aaKnown RBP13.58□□□□□ -0.24
SYVN1-204ENST00000449943 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 CCDC183Q5T5S1 534 aa13.58□□□□□ -0.24
SYVN1-204ENST00000449943 NECAB1Q8N987 351 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 RUFY2Q8WXA3 655 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 IP6K1Q92551 441 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 F13A1P00488 732 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 GPATCH3Q96I76 525 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYVN1-204ENST00000449943 SIL1Q9H173 461 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 ADCY9O60503 1353 aa13.57□□□□□ -0.24
SYVN1-204ENST00000449943 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
SYVN1-204ENST00000449943 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
SYVN1-204ENST00000449943 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
SYVN1-204ENST00000449943 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
SYVN1-204ENST00000449943 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
SYVN1-204ENST00000449943 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
SYVN1-204ENST00000449943 SETD1BQ9UPS6 1966 aaKnown RBP13.55□□□□□ -0.24
SYVN1-204ENST00000449943 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 EVA1CP58658 441 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 RAPGEF4Q8WZA2 1011 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 HYPKQ9NX55 129 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 CEMIPQ8WUJ3 1361 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
SYVN1-204ENST00000449943 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
SYVN1-204ENST00000449943 UBE2HP62256 183 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
SYVN1-204ENST00000449943 ATP6V1DQ9Y5K8 247 aa13.54□□□□□ -0.24
SYVN1-204ENST00000449943 ADCY5O95622 1261 aa13.54□□□□□ -0.24
SYVN1-204ENST00000449943 FGD1P98174 961 aa13.54□□□□□ -0.24
SYVN1-204ENST00000449943 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
SYVN1-204ENST00000449943 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
SYVN1-204ENST00000449943 ZKSCAN1P17029 563 aaPredicted RBP13.54□□□□□ -0.24
SYVN1-204ENST00000449943 MCM5P33992 734 aa13.54□□□□□ -0.24
SYVN1-204ENST00000449943 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
SYVN1-204ENST00000449943 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
SYVN1-204ENST00000449943 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
SYVN1-204ENST00000449943 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
SYVN1-204ENST00000449943 RBM8AQ9Y5S9 174 aaKnown RBP13.53□□□□□ -0.24
SYVN1-204ENST00000449943 ANKARQ7Z5J8 1434 aa13.53□□□□□ -0.24
SYVN1-204ENST00000449943 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYVN1-204ENST00000449943 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
SYVN1-204ENST00000449943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
SYVN1-204ENST00000449943 HOXB7P09629 217 aa13.53□□□□□ -0.24
SYVN1-204ENST00000449943 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
SYVN1-204ENST00000449943 KLHDC4Q8TBB5 520 aa13.53□□□□□ -0.24
SYVN1-204ENST00000449943 ME3Q16798 604 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 SUCLG2Q96I99 432 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.24
SYVN1-204ENST00000449943 KSR2Q6VAB6 950 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 FAM184AQ8NB25 1140 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 FSD1Q9BTV5 496 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.24
SYVN1-204ENST00000449943 MTMR6Q9Y217 621 aa13.52□□□□□ -0.24
SYVN1-204ENST00000449943 VPS53Q5VIR6 699 aa13.52□□□□□ -0.25
SYVN1-204ENST00000449943 FAM173BQ6P4H8 233 aa13.52□□□□□ -0.25
SYVN1-204ENST00000449943 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
SYVN1-204ENST00000449943 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
SYVN1-204ENST00000449943 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
SYVN1-204ENST00000449943 CCDC171Q6TFL3 1326 aa13.52□□□□□ -0.25
SYVN1-204ENST00000449943 COL9A3Q14050 684 aaPredicted RBP13.52□□□□□ -0.25
SYVN1-204ENST00000449943 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
SYVN1-204ENST00000449943 CREB3L3Q68CJ9 461 aa13.51□□□□□ -0.25
SYVN1-204ENST00000449943 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
SYVN1-204ENST00000449943 MYL6BP14649 208 aa13.51□□□□□ -0.25
SYVN1-204ENST00000449943 STK3Q13188 491 aa13.51□□□□□ -0.25
SYVN1-204ENST00000449943 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
SYVN1-204ENST00000449943 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms