RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
TOP3B-211ENST00000449704 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
TOP3B-211ENST00000449704 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
TOP3B-211ENST00000449704 HLFQ16534 295 aa20.3■□□□□ 0.84
TOP3B-211ENST00000449704 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
TOP3B-211ENST00000449704 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
TOP3B-211ENST00000449704 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
TOP3B-211ENST00000449704 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
TOP3B-211ENST00000449704 ERVV-1B6SEH8 477 aa20.29■□□□□ 0.84
TOP3B-211ENST00000449704 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
TOP3B-211ENST00000449704 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
TOP3B-211ENST00000449704 LAMB4A4D0S4 1761 aa20.29■□□□□ 0.84
TOP3B-211ENST00000449704 ZNF521Q96K83 1311 aa20.28■□□□□ 0.84
TOP3B-211ENST00000449704 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
TOP3B-211ENST00000449704 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
TOP3B-211ENST00000449704 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
TOP3B-211ENST00000449704 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
TOP3B-211ENST00000449704 RGL2O15211 777 aa20.27■□□□□ 0.84
TOP3B-211ENST00000449704 NPHP1O15259 732 aa20.27■□□□□ 0.84
TOP3B-211ENST00000449704 CCDC30Q5VVM6 783 aa20.27■□□□□ 0.84
TOP3B-211ENST00000449704 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
TOP3B-211ENST00000449704 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
TOP3B-211ENST00000449704 EXOSC9Q06265 439 aaKnown RBP20.26■□□□□ 0.83
TOP3B-211ENST00000449704 WWC3Q9ULE0 1092 aa20.26■□□□□ 0.83
TOP3B-211ENST00000449704 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
TOP3B-211ENST00000449704 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
TOP3B-211ENST00000449704 TGFB2P61812 414 aa20.25■□□□□ 0.83
TOP3B-211ENST00000449704 GPR162Q16538 588 aa20.25■□□□□ 0.83
TOP3B-211ENST00000449704 C10orf71Q711Q0 1435 aa20.25■□□□□ 0.83
TOP3B-211ENST00000449704 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
TOP3B-211ENST00000449704 GPTP24298 496 aa20.24■□□□□ 0.83
TOP3B-211ENST00000449704 GIGYF2Q6Y7W6 1299 aaKnown RBP20.24■□□□□ 0.83
TOP3B-211ENST00000449704 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
TOP3B-211ENST00000449704 CCDC24Q8N4L8 307 aa20.24■□□□□ 0.83
TOP3B-211ENST00000449704 DPEP1P16444 411 aa20.23■□□□□ 0.83
TOP3B-211ENST00000449704 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
TOP3B-211ENST00000449704 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
TOP3B-211ENST00000449704 E9PSI1 815 aa20.22■□□□□ 0.83
TOP3B-211ENST00000449704 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
TOP3B-211ENST00000449704 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
TOP3B-211ENST00000449704 PHAXQ9H814 394 aaKnown RBP20.22■□□□□ 0.83
TOP3B-211ENST00000449704 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
TOP3B-211ENST00000449704 VAMP4O75379 141 aa20.21■□□□□ 0.83
TOP3B-211ENST00000449704 TPTE2Q6XPS3 522 aa20.21■□□□□ 0.83
TOP3B-211ENST00000449704 GTF2E1P29083 439 aaPredicted RBP20.2■□□□□ 0.82
TOP3B-211ENST00000449704 ST5P78524 1137 aa20.2■□□□□ 0.82
TOP3B-211ENST00000449704 SLFN5Q08AF3 891 aa20.2■□□□□ 0.82
TOP3B-211ENST00000449704 PLBD2Q8NHP8 589 aa20.2■□□□□ 0.82
TOP3B-211ENST00000449704 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
TOP3B-211ENST00000449704 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
TOP3B-211ENST00000449704 CHRNA5P30532 468 aa20.19■□□□□ 0.82
TOP3B-211ENST00000449704 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
TOP3B-211ENST00000449704 HSP90AB3PQ58FF7 597 aa20.19■□□□□ 0.82
TOP3B-211ENST00000449704 ZNF34Q8IZ26 560 aa20.19■□□□□ 0.82
TOP3B-211ENST00000449704 BRIP1Q9BX63 1249 aa20.19■□□□□ 0.82
TOP3B-211ENST00000449704 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
TOP3B-211ENST00000449704 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
TOP3B-211ENST00000449704 RIC3Q7Z5B4 369 aa20.18■□□□□ 0.82
TOP3B-211ENST00000449704 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
TOP3B-211ENST00000449704 YBX3P16989 372 aaKnown RBP eCLIP20.17■□□□□ 0.82
TOP3B-211ENST00000449704 SUSD4Q5VX71 490 aa20.17■□□□□ 0.82
TOP3B-211ENST00000449704 C2CD5Q86YS7 1000 aa20.17■□□□□ 0.82
TOP3B-211ENST00000449704 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
TOP3B-211ENST00000449704 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
TOP3B-211ENST00000449704 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 H0YIN7 160 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 DDX58O95786 925 aaKnown RBP20.16■□□□□ 0.82
TOP3B-211ENST00000449704 KCNA3P22001 575 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 PDE6BP35913 854 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 PARP10Q53GL7 1025 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 PIM2Q9P1W9 311 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 BCS1LQ9Y276 419 aa20.16■□□□□ 0.82
TOP3B-211ENST00000449704 G2E3Q7L622 706 aa20.15■□□□□ 0.82
TOP3B-211ENST00000449704 ATP5J2-PTCD1G3V325 749 aa20.14■□□□□ 0.81
TOP3B-211ENST00000449704 GRIN3BO60391 1043 aa20.14■□□□□ 0.81
TOP3B-211ENST00000449704 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
TOP3B-211ENST00000449704 UTP14AQ9BVJ6 771 aaKnown RBP20.14■□□□□ 0.81
TOP3B-211ENST00000449704 ERFEQ4G0M1 354 aa20.13■□□□□ 0.81
TOP3B-211ENST00000449704 NLRP10Q86W26 655 aa20.13■□□□□ 0.81
TOP3B-211ENST00000449704 ZNF622Q969S3 477 aaKnown RBP eCLIP20.13■□□□□ 0.817e-13■■□□□ 12.8
TOP3B-211ENST00000449704 NTSR2O95665 410 aa20.12■□□□□ 0.81
TOP3B-211ENST00000449704 FLIIQ13045 1269 aa20.12■□□□□ 0.81
TOP3B-211ENST00000449704 DALRD3Q5D0E6 543 aaKnown RBP20.12■□□□□ 0.81
TOP3B-211ENST00000449704 MYD88Q99836 296 aa20.12■□□□□ 0.81
TOP3B-211ENST00000449704 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
TOP3B-211ENST00000449704 PI4KAP2A4QPH2 592 aa20.11■□□□□ 0.81
TOP3B-211ENST00000449704 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
TOP3B-211ENST00000449704 TRMT2AQ8IZ69 625 aaKnown RBP20.11■□□□□ 0.81
TOP3B-211ENST00000449704 PI4KAP1Q8N8J0 262 aa20.11■□□□□ 0.81
TOP3B-211ENST00000449704 ISCA1Q9BUE6 129 aa20.11■□□□□ 0.81
TOP3B-211ENST00000449704 TRMT112Q9UI30 125 aaKnown RBP20.11■□□□□ 0.81
TOP3B-211ENST00000449704 MAP3K2Q9Y2U5 619 aa20.11■□□□□ 0.81
TOP3B-211ENST00000449704 AFDNP55196 1824 aaKnown RBP20.11■□□□□ 0.81
TOP3B-211ENST00000449704 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
TOP3B-211ENST00000449704 FKBP5Q13451 457 aaPredicted RBP20.1■□□□□ 0.81
TOP3B-211ENST00000449704 ABCC12Q96J65 1359 aa20.09■□□□□ 0.81
TOP3B-211ENST00000449704 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
TOP3B-211ENST00000449704 KIF13BQ9NQT8 1826 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms