RNA–Protein interactions for RNA: ENST00000449405.1

LINC01939-202, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 3

Gene LINC01939, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-202ENST00000449405 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
LINC01939-202ENST00000449405 COL11A2P13942 1736 aaPredicted RBP20.54■□□□□ 0.88
LINC01939-202ENST00000449405 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
LINC01939-202ENST00000449405 DDNO94850 711 aaPredicted RBP20.54■□□□□ 0.88
LINC01939-202ENST00000449405 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
LINC01939-202ENST00000449405 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
LINC01939-202ENST00000449405 NPM2Q86SE8 214 aaKnown RBP20.54■□□□□ 0.88
LINC01939-202ENST00000449405 HSPA1AP0DMV8 641 aaKnown RBP20.53■□□□□ 0.88
LINC01939-202ENST00000449405 HSPA1BP0DMV9 641 aaKnown RBP20.53■□□□□ 0.88
LINC01939-202ENST00000449405 ST5P78524 1137 aa20.53■□□□□ 0.88
LINC01939-202ENST00000449405 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
LINC01939-202ENST00000449405 CLEC4GQ6UXB4 293 aa20.53■□□□□ 0.88
LINC01939-202ENST00000449405 TNS4Q8IZW8 715 aa20.53■□□□□ 0.88
LINC01939-202ENST00000449405 POTEIP0CG38 1075 aa20.52■□□□□ 0.88
LINC01939-202ENST00000449405 POTEJP0CG39 1038 aa20.52■□□□□ 0.88
LINC01939-202ENST00000449405 CHADLQ6NUI6 762 aa20.52■□□□□ 0.88
LINC01939-202ENST00000449405 KLRG2A4D1S0 409 aaPredicted RBP20.51■□□□□ 0.87
LINC01939-202ENST00000449405 NPHP1O15259 732 aa20.5■□□□□ 0.87
LINC01939-202ENST00000449405 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
LINC01939-202ENST00000449405 SOGA3Q5TF21 947 aa20.5■□□□□ 0.87
LINC01939-202ENST00000449405 NBPF26B4DH59 902 aa20.49■□□□□ 0.87
LINC01939-202ENST00000449405 CAPN15O75808 1086 aa20.49■□□□□ 0.87
LINC01939-202ENST00000449405 NBPF10Q6P3W6 841 aaKnown RBP20.49■□□□□ 0.87
LINC01939-202ENST00000449405 MCM10Q7L590 875 aa20.49■□□□□ 0.87
LINC01939-202ENST00000449405 NBPF5PQ86XG9 351 aaPredicted RBP20.49■□□□□ 0.87
LINC01939-202ENST00000449405 NBPF15Q8N660 670 aa20.49■□□□□ 0.87
LINC01939-202ENST00000449405 CREBZFQ9NS37 354 aa20.49■□□□□ 0.87
LINC01939-202ENST00000449405 TPTE2Q6XPS3 522 aa20.47■□□□□ 0.87
LINC01939-202ENST00000449405 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
LINC01939-202ENST00000449405 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
LINC01939-202ENST00000449405 NPR1P16066 1061 aa20.46■□□□□ 0.87
LINC01939-202ENST00000449405 DCTN1Q14203 1278 aa20.46■□□□□ 0.87
LINC01939-202ENST00000449405 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
LINC01939-202ENST00000449405 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
LINC01939-202ENST00000449405 CACNA1SQ13698 1873 aa20.45■□□□□ 0.86
LINC01939-202ENST00000449405 RGL2O15211 777 aa20.45■□□□□ 0.86
LINC01939-202ENST00000449405 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
LINC01939-202ENST00000449405 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
LINC01939-202ENST00000449405 CCDC93Q567U6 631 aa20.45■□□□□ 0.86
LINC01939-202ENST00000449405 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
LINC01939-202ENST00000449405 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
LINC01939-202ENST00000449405 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
LINC01939-202ENST00000449405 MKRN1Q9UHC7 482 aaKnown RBP20.45■□□□□ 0.86
LINC01939-202ENST00000449405 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
LINC01939-202ENST00000449405 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
LINC01939-202ENST00000449405 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
LINC01939-202ENST00000449405 HLFQ16534 295 aa20.44■□□□□ 0.86
LINC01939-202ENST00000449405 NIP7Q9Y221 180 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC01939-202ENST00000449405 PASKQ96RG2 1323 aa20.44■□□□□ 0.86
LINC01939-202ENST00000449405 IQCA1LA6NCM1 817 aa20.43■□□□□ 0.86
LINC01939-202ENST00000449405 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
LINC01939-202ENST00000449405 PPP2R1AP30153 589 aa20.43■□□□□ 0.86
LINC01939-202ENST00000449405 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
LINC01939-202ENST00000449405 LDHDQ86WU2 507 aa20.43■□□□□ 0.86
LINC01939-202ENST00000449405 ZNF277Q9NRM2 450 aaPredicted RBP20.43■□□□□ 0.86
LINC01939-202ENST00000449405 TAF7Q15545 349 aaPredicted RBP20.42■□□□□ 0.86
LINC01939-202ENST00000449405 MIS18AQ9NYP9 233 aa20.42■□□□□ 0.86
LINC01939-202ENST00000449405 FAM177BA6PVY3 158 aa20.41■□□□□ 0.86
LINC01939-202ENST00000449405 RTKN2Q8IZC4 609 aa20.41■□□□□ 0.86
LINC01939-202ENST00000449405 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
LINC01939-202ENST00000449405 SCN4AP35499 1836 aa20.41■□□□□ 0.86
LINC01939-202ENST00000449405 FZD9O00144 591 aa20.39■□□□□ 0.85
LINC01939-202ENST00000449405 ALDH1B1P30837 517 aa20.39■□□□□ 0.85
LINC01939-202ENST00000449405 SYNE4Q8N205 404 aa20.39■□□□□ 0.85
LINC01939-202ENST00000449405 CNTNAP1P78357 1384 aa20.38■□□□□ 0.85
LINC01939-202ENST00000449405 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
LINC01939-202ENST00000449405 TMEM88BA6NKF7 163 aa20.36■□□□□ 0.85
LINC01939-202ENST00000449405 FOXN1O15353 648 aa20.36■□□□□ 0.85
LINC01939-202ENST00000449405 EPHX2P34913 555 aa20.36■□□□□ 0.85
LINC01939-202ENST00000449405 IARSP41252 1262 aaKnown RBP20.36■□□□□ 0.85
LINC01939-202ENST00000449405 VEGFBP49765 207 aa20.36■□□□□ 0.85
LINC01939-202ENST00000449405 CRY2Q49AN0 593 aa20.36■□□□□ 0.85
LINC01939-202ENST00000449405 EAPPQ56P03 285 aaPredicted RBP20.36■□□□□ 0.85
LINC01939-202ENST00000449405 ERVV-1B6SEH8 477 aa20.35■□□□□ 0.85
LINC01939-202ENST00000449405 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
LINC01939-202ENST00000449405 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
LINC01939-202ENST00000449405 CLEC11AQ9Y240 323 aa20.35■□□□□ 0.85
LINC01939-202ENST00000449405 SNED1Q8TER0 1413 aa20.35■□□□□ 0.85
LINC01939-202ENST00000449405 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
LINC01939-202ENST00000449405 PSMD1Q99460 953 aa20.34■□□□□ 0.85
LINC01939-202ENST00000449405 HOXA10P31260 410 aaPredicted RBP20.33■□□□□ 0.85
LINC01939-202ENST00000449405 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.85
LINC01939-202ENST00000449405 PNMA8AQ86V59 439 aaPredicted RBP20.33■□□□□ 0.85
LINC01939-202ENST00000449405 CNTROBQ8N137 903 aa20.33■□□□□ 0.85
LINC01939-202ENST00000449405 GPC2Q8N158 579 aa20.33■□□□□ 0.85
LINC01939-202ENST00000449405 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
LINC01939-202ENST00000449405 EIF4A1P60842 406 aaKnown RBP20.32■□□□□ 0.84
LINC01939-202ENST00000449405 MAP1SQ66K74 1059 aaPredicted RBP20.32■□□□□ 0.84
LINC01939-202ENST00000449405 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
LINC01939-202ENST00000449405 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
LINC01939-202ENST00000449405 RRP7AQ9Y3A4 280 aaKnown RBP20.32■□□□□ 0.84
LINC01939-202ENST00000449405 ABCC12Q96J65 1359 aa20.32■□□□□ 0.84
LINC01939-202ENST00000449405 ADAMTSL1Q8N6G6 1762 aa20.31■□□□□ 0.84
LINC01939-202ENST00000449405 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
LINC01939-202ENST00000449405 CC2D2BQ6DHV5 1058 aa20.31■□□□□ 0.84
LINC01939-202ENST00000449405 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
LINC01939-202ENST00000449405 PLEKHF1Q96S99 279 aa20.31■□□□□ 0.84
LINC01939-202ENST00000449405 WBP1LQ9NX94 342 aa20.31■□□□□ 0.84
LINC01939-202ENST00000449405 NUP98P52948 1817 aa20.31■□□□□ 0.84
LINC01939-202ENST00000449405 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms