RNA–Protein interactions for RNA: ENST00000448333.1

KCTD3-202, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 2

Gene KCTD3, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-202ENST00000448333 RNF181Q9P0P0 153 aa12.66□□□□□ -0.38
KCTD3-202ENST00000448333 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
KCTD3-202ENST00000448333 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
KCTD3-202ENST00000448333 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
KCTD3-202ENST00000448333 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
KCTD3-202ENST00000448333 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
KCTD3-202ENST00000448333 ADCY9O60503 1353 aa12.65□□□□□ -0.38
KCTD3-202ENST00000448333 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
KCTD3-202ENST00000448333 RASSF7Q02833 373 aa12.64□□□□□ -0.39
KCTD3-202ENST00000448333 HLFQ16534 295 aa12.64□□□□□ -0.39
KCTD3-202ENST00000448333 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
KCTD3-202ENST00000448333 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
KCTD3-202ENST00000448333 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
KCTD3-202ENST00000448333 C21orf2O43822 256 aa12.63□□□□□ -0.39
KCTD3-202ENST00000448333 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
KCTD3-202ENST00000448333 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
KCTD3-202ENST00000448333 KIF6Q6ZMV9 814 aa12.63□□□□□ -0.39
KCTD3-202ENST00000448333 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
KCTD3-202ENST00000448333 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
KCTD3-202ENST00000448333 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
KCTD3-202ENST00000448333 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
KCTD3-202ENST00000448333 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
KCTD3-202ENST00000448333 ARFGEF1Q9Y6D6 1849 aa12.61□□□□□ -0.39
KCTD3-202ENST00000448333 NMRK2Q9NPI5 230 aa12.61□□□□□ -0.39
KCTD3-202ENST00000448333 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
KCTD3-202ENST00000448333 KIF3CO14782 793 aa12.6□□□□□ -0.39
KCTD3-202ENST00000448333 ANXA1P04083 346 aa12.6□□□□□ -0.39
KCTD3-202ENST00000448333 GPTP24298 496 aa12.6□□□□□ -0.39
KCTD3-202ENST00000448333 CNKSR1Q969H4 720 aa12.6□□□□□ -0.39
KCTD3-202ENST00000448333 MASTLQ96GX5 879 aa12.6□□□□□ -0.39
KCTD3-202ENST00000448333 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
KCTD3-202ENST00000448333 KDM3BQ7LBC6 1761 aa12.59□□□□□ -0.39
KCTD3-202ENST00000448333 SRGNP10124 158 aa12.59□□□□□ -0.39
KCTD3-202ENST00000448333 LMNB1P20700 586 aa12.59□□□□□ -0.39
KCTD3-202ENST00000448333 AIMP1Q12904 312 aaKnown RBP12.59□□□□□ -0.39
KCTD3-202ENST00000448333 NUTM1Q86Y26 1132 aa12.59□□□□□ -0.39
KCTD3-202ENST00000448333 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
KCTD3-202ENST00000448333 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
KCTD3-202ENST00000448333 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
KCTD3-202ENST00000448333 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
KCTD3-202ENST00000448333 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
KCTD3-202ENST00000448333 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
KCTD3-202ENST00000448333 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
KCTD3-202ENST00000448333 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
KCTD3-202ENST00000448333 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
KCTD3-202ENST00000448333 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 NFKBIEO00221 500 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 CHL1O00533 1208 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 APAF1O14727 1248 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 PRELPP51888 382 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
KCTD3-202ENST00000448333 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 RGL2O15211 777 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 TOMM70O94826 608 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 NPR1P16066 1061 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 PDIA6Q15084 440 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 COPS6Q7L5N1 327 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 ERBB4Q15303 1308 aa12.56□□□□□ -0.4
KCTD3-202ENST00000448333 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
KCTD3-202ENST00000448333 HSPA6P17066 643 aa12.55□□□□□ -0.4
KCTD3-202ENST00000448333 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
KCTD3-202ENST00000448333 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
KCTD3-202ENST00000448333 TAOK3Q9H2K8 898 aa12.55□□□□□ -0.4
KCTD3-202ENST00000448333 DLEC1Q9Y238 1755 aa12.55□□□□□ -0.4
KCTD3-202ENST00000448333 SBF1O95248 1867 aa12.55□□□□□ -0.4
KCTD3-202ENST00000448333 TCERG1O14776 1098 aaKnown RBP12.54□□□□□ -0.4
KCTD3-202ENST00000448333 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 PPP1R42Q7Z4L9 355 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
KCTD3-202ENST00000448333 ZNF428Q96B54 188 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
KCTD3-202ENST00000448333 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
KCTD3-202ENST00000448333 SLX4Q8IY92 1834 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 CACNA1SQ13698 1873 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 GLTPD2A6NH11 291 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
KCTD3-202ENST00000448333 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
KCTD3-202ENST00000448333 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 CHPF2Q9P2E5 772 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 NUP98P52948 1817 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
KCTD3-202ENST00000448333 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.41
KCTD3-202ENST00000448333 ANP32CO43423 234 aa12.52□□□□□ -0.41
KCTD3-202ENST00000448333 PARP10Q53GL7 1025 aa12.52□□□□□ -0.41
KCTD3-202ENST00000448333 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
KCTD3-202ENST00000448333 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
KCTD3-202ENST00000448333 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
KCTD3-202ENST00000448333 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms