RNA–Protein interactions for RNA: ENST00000447830.2

SPATC1-202, Transcript of spermatogenesis and centriole associated 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPATC1, Length 1,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATC1-202ENST00000447830 DDX21Q9NR30 783 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPATC1-202ENST00000447830 TNS1Q9HBL0 1735 aaKnown RBP19.04■□□□□ 0.64
SPATC1-202ENST00000447830 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
SPATC1-202ENST00000447830 SDSP20132 328 aa19.03■□□□□ 0.64
SPATC1-202ENST00000447830 PDE1AP54750 535 aa19.03■□□□□ 0.64
SPATC1-202ENST00000447830 PROSER3Q2NL68 480 aa19.03■□□□□ 0.64
SPATC1-202ENST00000447830 SNX21Q969T3 373 aa19.03■□□□□ 0.64
SPATC1-202ENST00000447830 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
SPATC1-202ENST00000447830 NFKBIBQ15653 356 aa19.02■□□□□ 0.64
SPATC1-202ENST00000447830 NHSQ6T4R5 1651 aa19.02■□□□□ 0.63
SPATC1-202ENST00000447830 ERVV-2B6SEH9 535 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 RAB11FIP3O75154 756 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 PDIA6Q15084 440 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 MAP3K2Q9Y2U5 619 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
SPATC1-202ENST00000447830 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
SPATC1-202ENST00000447830 MTX1Q13505 466 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 CASC1Q6TDU7 716 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 PPP1R42Q7Z4L9 355 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 HDAC5Q9UQL6 1122 aa19.01■□□□□ 0.63
SPATC1-202ENST00000447830 KIF2CQ99661 725 aa19■□□□□ 0.63
SPATC1-202ENST00000447830 BCL9O00512 1426 aa19■□□□□ 0.63
SPATC1-202ENST00000447830 AOX1Q06278 1338 aa18.99■□□□□ 0.63
SPATC1-202ENST00000447830 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
SPATC1-202ENST00000447830 ITGB4P16144 1822 aa18.99■□□□□ 0.63
SPATC1-202ENST00000447830 MX1P20591 662 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 HSCBQ8IWL3 235 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 LINS1Q8NG48 757 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 LAMB4A4D0S4 1761 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 UTYO14607 1347 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 SOCS7O14512 581 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
SPATC1-202ENST00000447830 SRGAP3O43295 1099 aa18.97■□□□□ 0.63
SPATC1-202ENST00000447830 SNRPA1P09661 255 aaKnown RBP18.97■□□□□ 0.63
SPATC1-202ENST00000447830 FMNL2Q96PY5 1086 aa18.97■□□□□ 0.63
SPATC1-202ENST00000447830 HSP90AB4PQ58FF6 505 aa18.96■□□□□ 0.63
SPATC1-202ENST00000447830 FAM196AQ6ZSG2 479 aa18.96■□□□□ 0.63
SPATC1-202ENST00000447830 KAT6BQ8WYB5 2073 aa18.96■□□□□ 0.63
SPATC1-202ENST00000447830 BTAF1O14981 1849 aa18.96■□□□□ 0.63
SPATC1-202ENST00000447830 SURF6O75683 361 aaKnown RBP18.95■□□□□ 0.62
SPATC1-202ENST00000447830 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
SPATC1-202ENST00000447830 USP26Q9BXU7 913 aa18.95■□□□□ 0.62
SPATC1-202ENST00000447830 BCL11AQ9H165 835 aa18.95■□□□□ 0.62
SPATC1-202ENST00000447830 SLKQ9H2G2 1235 aaPredicted RBP18.95■□□□□ 0.62
SPATC1-202ENST00000447830 C9orf78Q9NZ63 289 aaPredicted RBP18.95■□□□□ 0.62
SPATC1-202ENST00000447830 UBR2Q8IWV8 1755 aa18.95■□□□□ 0.62
SPATC1-202ENST00000447830 PAPPAQ13219 1627 aa18.94■□□□□ 0.62
SPATC1-202ENST00000447830 PTF1AQ7RTS3 328 aa18.94■□□□□ 0.62
SPATC1-202ENST00000447830 LRP10Q7Z4F1 713 aa18.94■□□□□ 0.62
SPATC1-202ENST00000447830 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
SPATC1-202ENST00000447830 GRM8O00222 908 aa18.93■□□□□ 0.62
SPATC1-202ENST00000447830 REC8O95072 547 aa18.93■□□□□ 0.62
SPATC1-202ENST00000447830 RHPN1Q8TCX5 695 aa18.93■□□□□ 0.62
SPATC1-202ENST00000447830 PIGBQ92521 554 aa18.93■□□□□ 0.62
SPATC1-202ENST00000447830 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
SPATC1-202ENST00000447830 TMOD3Q9NYL9 352 aa18.93■□□□□ 0.62
SPATC1-202ENST00000447830 KCPQ6ZWJ8 1503 aa18.92■□□□□ 0.62
SPATC1-202ENST00000447830 TRIM37O94972 964 aa18.92■□□□□ 0.62
SPATC1-202ENST00000447830 CWF19L2Q2TBE0 894 aaKnown RBP18.92■□□□□ 0.62
SPATC1-202ENST00000447830 ACSBG1Q96GR2 724 aa18.92■□□□□ 0.62
SPATC1-202ENST00000447830 ERBB4Q15303 1308 aa18.92■□□□□ 0.62
SPATC1-202ENST00000447830 ERC2O15083 957 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 KCNQ2O43526 872 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
SPATC1-202ENST00000447830 MYL6BP14649 208 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 RIC3Q7Z5B4 369 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 DEKP35659 375 aaKnown RBP18.91■□□□□ 0.62
SPATC1-202ENST00000447830 NEXNQ0ZGT2 675 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 AIMP1Q12904 312 aaKnown RBP18.91■□□□□ 0.62
SPATC1-202ENST00000447830 RABEP1Q15276 862 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
SPATC1-202ENST00000447830 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
SPATC1-202ENST00000447830 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
SPATC1-202ENST00000447830 METTL22Q9BUU2 404 aaPredicted RBP18.9■□□□□ 0.62
SPATC1-202ENST00000447830 USP42Q9H9J4 1324 aaKnown RBP18.9■□□□□ 0.62
SPATC1-202ENST00000447830 COPS6Q7L5N1 327 aa18.89■□□□□ 0.61
SPATC1-202ENST00000447830 IL1RAPL2Q9NP60 686 aa18.89■□□□□ 0.61
SPATC1-202ENST00000447830 ATG3Q9NT62 314 aa18.89■□□□□ 0.61
SPATC1-202ENST00000447830 CHMP5Q9NZZ3 219 aa18.89■□□□□ 0.61
SPATC1-202ENST00000447830 ARFGEF2Q9Y6D5 1785 aa18.89■□□□□ 0.61
SPATC1-202ENST00000447830 RGPD3A6NKT7 1758 aaPredicted RBP18.88■□□□□ 0.61
SPATC1-202ENST00000447830 RGPD4Q7Z3J3 1758 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 NEURL1BA8MQ27 555 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 DDIT3P35638 169 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 TSHZ3Q63HK5 1081 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 COL15A1P39059 1388 aa18.88■□□□□ 0.61
SPATC1-202ENST00000447830 NBPF26B4DH59 902 aa18.87■□□□□ 0.61
SPATC1-202ENST00000447830 K7ELQ4 463 aaPredicted RBP18.87■□□□□ 0.61
SPATC1-202ENST00000447830 NBPF14Q5TI25 921 aa18.87■□□□□ 0.61
SPATC1-202ENST00000447830 NBPF10Q6P3W6 841 aaKnown RBP18.87■□□□□ 0.61
SPATC1-202ENST00000447830 NBPF15Q8N660 670 aa18.87■□□□□ 0.61
SPATC1-202ENST00000447830 PI4K2BQ8TCG2 481 aa18.87■□□□□ 0.61
SPATC1-202ENST00000447830 SUCLG2Q96I99 432 aa18.87■□□□□ 0.61
SPATC1-202ENST00000447830 PRIM1P49642 420 aaKnown RBP18.86■□□□□ 0.61
SPATC1-202ENST00000447830 GCKRQ14397 625 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms