RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 SLC39A6Q13433 755 aa13.96□□□□□ -0.17
GNE-203ENST00000447283 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
GNE-203ENST00000447283 GJD4Q96KN9 370 aaPredicted RBP13.96□□□□□ -0.17
GNE-203ENST00000447283 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.17
GNE-203ENST00000447283 TNS2Q63HR2 1409 aa13.96□□□□□ -0.17
GNE-203ENST00000447283 ERC2O15083 957 aa13.96□□□□□ -0.18
GNE-203ENST00000447283 CCDC30Q5VVM6 783 aa13.96□□□□□ -0.18
GNE-203ENST00000447283 ANP32BQ92688 251 aaKnown RBP13.96□□□□□ -0.18
GNE-203ENST00000447283 FBXO41Q8TF61 875 aa13.95□□□□□ -0.18
GNE-203ENST00000447283 MRC1P22897 1456 aa13.95□□□□□ -0.18
GNE-203ENST00000447283 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
GNE-203ENST00000447283 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
GNE-203ENST00000447283 PKP1Q13835 747 aa13.95□□□□□ -0.18
GNE-203ENST00000447283 STK31Q9BXU1 1019 aa13.95□□□□□ -0.18
GNE-203ENST00000447283 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
GNE-203ENST00000447283 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
GNE-203ENST00000447283 A0A0G2JS52 829 aa13.94□□□□□ -0.18
GNE-203ENST00000447283 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
GNE-203ENST00000447283 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
GNE-203ENST00000447283 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
GNE-203ENST00000447283 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 PDE1AP54750 535 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 ZSCAN30Q86W11 494 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 HOMEZQ8IX15 550 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 MARCH10Q8NA82 808 aaPredicted RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 QTRT2Q9H974 415 aaKnown RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 ZDHHC9Q9Y397 364 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 KDM3BQ7LBC6 1761 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 CAVIN1Q6NZI2 390 aaKnown RBP13.93□□□□□ -0.18
GNE-203ENST00000447283 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
GNE-203ENST00000447283 APBB1O00213 710 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 HS1BP3Q53T59 392 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
GNE-203ENST00000447283 PIGBQ92521 554 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 SALL3Q9BXA9 1300 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 ATRNO75882 1429 aa13.92□□□□□ -0.18
GNE-203ENST00000447283 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
GNE-203ENST00000447283 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
GNE-203ENST00000447283 MCM2P49736 904 aa13.91□□□□□ -0.18
GNE-203ENST00000447283 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
GNE-203ENST00000447283 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
GNE-203ENST00000447283 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.18
GNE-203ENST00000447283 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.18
GNE-203ENST00000447283 TPM2P07951 284 aa13.9□□□□□ -0.18
GNE-203ENST00000447283 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
GNE-203ENST00000447283 G2E3Q7L622 706 aa13.9□□□□□ -0.18
GNE-203ENST00000447283 GPT2Q8TD30 523 aa13.9□□□□□ -0.18
GNE-203ENST00000447283 PDLIM2Q96JY6 352 aa13.9□□□□□ -0.18
GNE-203ENST00000447283 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
GNE-203ENST00000447283 PRPF40AO75400 957 aaKnown RBP13.89□□□□□ -0.19
GNE-203ENST00000447283 GNAI2P04899 355 aa13.89□□□□□ -0.19
GNE-203ENST00000447283 ZNF772Q68DY9 489 aaPredicted RBP13.89□□□□□ -0.19
GNE-203ENST00000447283 IL17RAQ96F46 866 aa13.89□□□□□ -0.19
GNE-203ENST00000447283 ESYT1Q9BSJ8 1104 aa13.89□□□□□ -0.19
GNE-203ENST00000447283 RBSNQ9H1K0 784 aa13.89□□□□□ -0.19
GNE-203ENST00000447283 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
GNE-203ENST00000447283 F6X3S4 739 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
GNE-203ENST00000447283 ANAPC15P60006 121 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 CUL4AQ13619 759 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 TMX3Q96JJ7 454 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 ASAP1Q9ULH1 1129 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 BCL9O00512 1426 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 ACSBG1Q96GR2 724 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 ATG3Q9NT62 314 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 CHPF2Q9P2E5 772 aa13.88□□□□□ -0.19
GNE-203ENST00000447283 GLI3P10071 1580 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 OFD1O75665 1012 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 NEK4P51957 841 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 FLIIQ13045 1269 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
GNE-203ENST00000447283 SEPT12Q8IYM1 358 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 LRRCC1Q9C099 1032 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
GNE-203ENST00000447283 BRD1O95696 1058 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 MBD3O95983 291 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 GNAI3P08754 354 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 MCCP23508 829 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 MSNP26038 577 aaKnown RBP13.86□□□□□ -0.19
GNE-203ENST00000447283 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
GNE-203ENST00000447283 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 TOGARAM1Q9Y4F4 1720 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 MX1P20591 662 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 ATP8B2P98198 1209 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
GNE-203ENST00000447283 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
GNE-203ENST00000447283 TERF1P54274 439 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
GNE-203ENST00000447283 PHAXQ9H814 394 aaKnown RBP13.85□□□□□ -0.19
GNE-203ENST00000447283 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms