RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 EXOC5O00471 708 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 GCP02774 474 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 FAM50AQ14320 339 aaKnown RBP5.01□□□□□ -1.61
PMS1-215ENST00000447232 HIC1Q14526 733 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 PXYLP1Q8TE99 480 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 KCPQ6ZWJ8 1503 aa5□□□□□ -1.61
PMS1-215ENST00000447232 POLR3AO14802 1390 aaPredicted RBP5□□□□□ -1.61
PMS1-215ENST00000447232 PLEKHG2Q9H7P9 1386 aa5□□□□□ -1.61
PMS1-215ENST00000447232 KIAA1551Q9HCM1 1747 aa5□□□□□ -1.61
PMS1-215ENST00000447232 ZPR1O75312 459 aa5□□□□□ -1.61
PMS1-215ENST00000447232 FECHP22830 423 aa5□□□□□ -1.61
PMS1-215ENST00000447232 CTCFP49711 727 aaPredicted RBP5□□□□□ -1.61
PMS1-215ENST00000447232 MSL1Q68DK7 614 aa5□□□□□ -1.61
PMS1-215ENST00000447232 SMYD5Q6GMV2 418 aa5□□□□□ -1.61
PMS1-215ENST00000447232 EIF4ENIF1Q9NRA8 985 aaKnown RBP5□□□□□ -1.61
PMS1-215ENST00000447232 SPATA31E1Q6ZUB1 1445 aa5□□□□□ -1.61
PMS1-215ENST00000447232 OATP04181 439 aa5□□□□□ -1.61
PMS1-215ENST00000447232 PRR14Q9BWN1 585 aa5□□□□□ -1.61
PMS1-215ENST00000447232 C14orf93Q9H972 538 aaKnown RBP5□□□□□ -1.61
PMS1-215ENST00000447232 PCDHB3Q9Y5E6 796 aa5□□□□□ -1.61
PMS1-215ENST00000447232 WASLO00401 505 aaPredicted RBP4.99□□□□□ -1.61
PMS1-215ENST00000447232 GPR37O15354 613 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 SLC10A3P09131 477 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 CARD10Q9BWT7 1032 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 PRKD2Q9BZL6 878 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 USP54Q70EL1 1684 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 SLIT3O75094 1523 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.99□□□□□ -1.61
PMS1-215ENST00000447232 KCNQ4P56696 695 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 BLOC1S3Q6QNY0 202 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 METTL3Q86U44 580 aaKnown RBP4.99□□□□□ -1.61
PMS1-215ENST00000447232 ABTB2Q8N961 1025 aa4.99□□□□□ -1.61
PMS1-215ENST00000447232 KIF13BQ9NQT8 1826 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 KDM2BQ8NHM5 1336 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 ACTN4O43707 911 aaKnown RBP4.98□□□□□ -1.61
PMS1-215ENST00000447232 RRAGCQ9HB90 399 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 PPIP5K1Q6PFW1 1433 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 CCDC7Q96M83 1385 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 CCDC85CA6NKD9 419 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 GNPATO15228 680 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 LBX1P52954 281 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 NLRP13Q86W25 1043 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 POGKQ9P215 609 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 V9GY48 417 aaPredicted RBP4.98□□□□□ -1.61
PMS1-215ENST00000447232 RGPD5Q99666 1765 aa4.98□□□□□ -1.61
PMS1-215ENST00000447232 C9orf131Q5VYM1 1079 aa4.97□□□□□ -1.61
PMS1-215ENST00000447232 TMUB1Q9BVT8 246 aa4.97□□□□□ -1.61
PMS1-215ENST00000447232 VIRMAQ69YN4 1812 aaKnown RBP4.97□□□□□ -1.61
PMS1-215ENST00000447232 ADGRB1O14514 1584 aa4.97□□□□□ -1.61
PMS1-215ENST00000447232 BRCA1P38398 1863 aaKnown RBP4.97□□□□□ -1.61
PMS1-215ENST00000447232 KAT6BQ8WYB5 2073 aa4.97□□□□□ -1.61
PMS1-215ENST00000447232 CFHP08603 1231 aa4.97□□□□□ -1.61
PMS1-215ENST00000447232 ACEP12821 1306 aa4.96□□□□□ -1.61
PMS1-215ENST00000447232 MINK1Q8N4C8 1332 aaPredicted RBP4.96□□□□□ -1.61
PMS1-215ENST00000447232 CNTNAP1P78357 1384 aa4.96□□□□□ -1.61
PMS1-215ENST00000447232 CPSF1Q10570 1443 aaKnown RBP4.96□□□□□ -1.62
PMS1-215ENST00000447232 HSPA8P11142 646 aaKnown RBP4.96□□□□□ -1.62
PMS1-215ENST00000447232 CFAP70Q5T0N1 1121 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 NUDT16Q96DE0 195 aaKnown RBP4.96□□□□□ -1.62
PMS1-215ENST00000447232 MKRN1Q9UHC7 482 aaKnown RBP4.96□□□□□ -1.62
PMS1-215ENST00000447232 ARFGEF1Q9Y6D6 1849 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 NSD2O96028 1365 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 N4BP2Q86UW6 1770 aaPredicted RBP4.96□□□□□ -1.62
PMS1-215ENST00000447232 PLEKHG3A1L390 1219 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 GFRA3O60609 400 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 GGCXP38435 758 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 KMT5BQ4FZB7 885 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 Q6ZNB5 142 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 ARHGAP27Q6ZUM4 889 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 AIDAQ96BJ3 306 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 TOGARAM1Q9Y4F4 1720 aa4.96□□□□□ -1.62
PMS1-215ENST00000447232 SBF1O95248 1867 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 C5P01031 1676 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 RNF223E7ERA6 249 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 TLL1O43897 1013 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 LAPTM4AQ15012 233 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 RGL3Q3MIN7 710 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 PRPF38BQ5VTL8 546 aaKnown RBP4.95□□□□□ -1.62
PMS1-215ENST00000447232 FLAD1Q8NFF5 587 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 PHOX2BQ99453 314 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 CCNL1Q9UK58 526 aaPredicted RBP4.95□□□□□ -1.62
PMS1-215ENST00000447232 BCS1LQ9Y276 419 aa4.95□□□□□ -1.62
PMS1-215ENST00000447232 TAF1LQ8IZX4 1826 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 LCE2BO14633 110 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 ARHGEF25Q86VW2 580 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 ZBTB7CA1YPR0 619 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 VEGFAP15692 232 aaPredicted RBP4.94□□□□□ -1.62
PMS1-215ENST00000447232 TGFB2P61812 414 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 SCUBE3Q8IX30 993 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 VSIG10Q8N0Z9 540 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 NLRP7Q8WX94 980 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 EMID1Q96A84 441 aaPredicted RBP4.94□□□□□ -1.62
PMS1-215ENST00000447232 DAXXQ9UER7 740 aaPredicted RBP4.94□□□□□ -1.62
PMS1-215ENST00000447232 ANKRD36BQ8N2N9 1353 aa4.94□□□□□ -1.62
PMS1-215ENST00000447232 DOT1LQ8TEK3 1739 aa4.93□□□□□ -1.62
PMS1-215ENST00000447232 UBR3Q6ZT12 1888 aa4.93□□□□□ -1.62
PMS1-215ENST00000447232 AMIGO3Q86WK7 504 aa4.93□□□□□ -1.62
PMS1-215ENST00000447232 ZC3H4Q9UPT8 1303 aaKnown RBP4.93□□□□□ -1.62
PMS1-215ENST00000447232 CSB-PGBD3P0DP91 1061 aa4.93□□□□□ -1.62
PMS1-215ENST00000447232 IL2RBP14784 551 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms