RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 TNNQ9UQP3 1299 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 COL15A1P39059 1388 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
LIN54-203ENST00000446851 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
LIN54-203ENST00000446851 ABCC6O95255 1503 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 SSFA2P28290 1259 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
LIN54-203ENST00000446851 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
LIN54-203ENST00000446851 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
LIN54-203ENST00000446851 CRYBG1Q9Y4K1 1723 aa12.97□□□□□ -0.33
LIN54-203ENST00000446851 GPR162Q16538 588 aa12.97□□□□□ -0.33
LIN54-203ENST00000446851 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
LIN54-203ENST00000446851 SERPINB2P05120 415 aa12.97□□□□□ -0.33
LIN54-203ENST00000446851 SYNE4Q8N205 404 aa12.97□□□□□ -0.33
LIN54-203ENST00000446851 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
LIN54-203ENST00000446851 BCS1LQ9Y276 419 aa12.96□□□□□ -0.33
LIN54-203ENST00000446851 ST5P78524 1137 aa12.96□□□□□ -0.33
LIN54-203ENST00000446851 NFIXQ14938 502 aa12.96□□□□□ -0.33
LIN54-203ENST00000446851 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
LIN54-203ENST00000446851 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
LIN54-203ENST00000446851 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.34
LIN54-203ENST00000446851 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
LIN54-203ENST00000446851 PPP1R42Q7Z4L9 355 aa12.95□□□□□ -0.34
LIN54-203ENST00000446851 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
LIN54-203ENST00000446851 RPGRQ92834 1020 aaKnown RBP12.95□□□□□ -0.34
LIN54-203ENST00000446851 KIF16BQ96L93 1317 aa12.95□□□□□ -0.34
LIN54-203ENST00000446851 LRRC37A3O60309 1634 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 G3V3G9 751 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
LIN54-203ENST00000446851 GYS1P13807 737 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
LIN54-203ENST00000446851 BRWD3Q6RI45 1802 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 MAP3K15Q6ZN16 1313 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
LIN54-203ENST00000446851 PLBD2Q8NHP8 589 aa12.94□□□□□ -0.34
LIN54-203ENST00000446851 UBTFL1P0CB47 393 aaPredicted RBP12.93□□□□□ -0.34
LIN54-203ENST00000446851 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
LIN54-203ENST00000446851 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 SIL1Q9H173 461 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
LIN54-203ENST00000446851 HOXB7P09629 217 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 CHRNA5P30532 468 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
LIN54-203ENST00000446851 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
LIN54-203ENST00000446851 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
LIN54-203ENST00000446851 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
LIN54-203ENST00000446851 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
LIN54-203ENST00000446851 TRIM27P14373 513 aa12.92□□□□□ -0.34
LIN54-203ENST00000446851 ADRA2BP18089 450 aa12.92□□□□□ -0.34
LIN54-203ENST00000446851 TCIRG1Q13488 830 aa12.92□□□□□ -0.34
LIN54-203ENST00000446851 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
LIN54-203ENST00000446851 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
LIN54-203ENST00000446851 IRS4O14654 1257 aaPredicted RBP12.91□□□□□ -0.34
LIN54-203ENST00000446851 TMEM57Q8N5G2 664 aa12.91□□□□□ -0.34
LIN54-203ENST00000446851 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
LIN54-203ENST00000446851 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
LIN54-203ENST00000446851 SUSD4Q5VX71 490 aa12.91□□□□□ -0.34
LIN54-203ENST00000446851 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
LIN54-203ENST00000446851 H0YIN7 160 aa12.9□□□□□ -0.34
LIN54-203ENST00000446851 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
LIN54-203ENST00000446851 PDIA6Q15084 440 aa12.9□□□□□ -0.34
LIN54-203ENST00000446851 FHDC1Q9C0D6 1143 aaPredicted RBP12.9□□□□□ -0.34
LIN54-203ENST00000446851 C2CD5Q86YS7 1000 aa12.9□□□□□ -0.34
LIN54-203ENST00000446851 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
LIN54-203ENST00000446851 DOT1LQ8TEK3 1739 aa12.9□□□□□ -0.35
LIN54-203ENST00000446851 KCNJ4P48050 445 aa12.89□□□□□ -0.35
LIN54-203ENST00000446851 MPHOSPH8Q99549 860 aa12.89□□□□□ -0.35
LIN54-203ENST00000446851 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
LIN54-203ENST00000446851 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
LIN54-203ENST00000446851 MS4A1P11836 297 aa12.89□□□□□ -0.35
LIN54-203ENST00000446851 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
LIN54-203ENST00000446851 ALDH1L2Q3SY69 923 aa12.89□□□□□ -0.35
LIN54-203ENST00000446851 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
LIN54-203ENST00000446851 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
LIN54-203ENST00000446851 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
LIN54-203ENST00000446851 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
LIN54-203ENST00000446851 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
LIN54-203ENST00000446851 LINS1Q8NG48 757 aa12.88□□□□□ -0.35
LIN54-203ENST00000446851 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
LIN54-203ENST00000446851 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
LIN54-203ENST00000446851 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 MEIS3Q99687 375 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 UTRNP46939 3433 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
LIN54-203ENST00000446851 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
LIN54-203ENST00000446851 DDR1Q08345 913 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms