RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
HMGN1P36-201ENST00000446623 SBNO2Q9Y2G9 1366 aa8.29□□□□□ -1.08
HMGN1P36-201ENST00000446623 FAM208AQ9UK61 1670 aaKnown RBP8.28□□□□□ -1.08
HMGN1P36-201ENST00000446623 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
HMGN1P36-201ENST00000446623 NLGN2Q8NFZ4 835 aa8.28□□□□□ -1.08
HMGN1P36-201ENST00000446623 DOT1LQ8TEK3 1739 aa8.28□□□□□ -1.08
HMGN1P36-201ENST00000446623 LY75O60449 1722 aa8.27□□□□□ -1.09
HMGN1P36-201ENST00000446623 DNAJB2P25686 324 aa8.27□□□□□ -1.09
HMGN1P36-201ENST00000446623 KCNQ4P56696 695 aa8.27□□□□□ -1.09
HMGN1P36-201ENST00000446623 DDX54Q8TDD1 881 aaKnown RBP8.27□□□□□ -1.09
HMGN1P36-201ENST00000446623 TFCP2L1Q9NZI6 479 aa8.27□□□□□ -1.09
HMGN1P36-201ENST00000446623 NSD2O96028 1365 aa8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 ANKRD36BQ8N2N9 1353 aa8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 TMC1Q8TDI8 760 aa8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 PXYLP1Q8TE99 480 aa8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 SYTL4Q96C24 671 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 SIN3AQ96ST3 1273 aa8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
HMGN1P36-201ENST00000446623 OATP04181 439 aa8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 YBX3P16989 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 IFFO2Q5TF58 517 aa8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 NYAP1Q6ZVC0 841 aa8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 METTL3Q86U44 580 aaKnown RBP8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 SLF2Q8IX21 1173 aa8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 IP6K1Q92551 441 aa8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 LTV1Q96GA3 475 aaPredicted RBP8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 TMEM134Q9H6X4 195 aa8.25□□□□□ -1.09
HMGN1P36-201ENST00000446623 A0A1W2PP64 1363 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 GRIN3BO60391 1043 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 NEUROD1Q13562 356 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 SLC12A5Q9H2X9 1139 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 TERF2IPQ9NYB0 399 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 CCNL1Q9UK58 526 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 RGPD2P0DJD1 1756 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 MEGF6O75095 1541 aa8.24□□□□□ -1.09
HMGN1P36-201ENST00000446623 ATP10DQ9P241 1426 aa8.23□□□□□ -1.09
HMGN1P36-201ENST00000446623 APLP1P51693 650 aa8.23□□□□□ -1.09
HMGN1P36-201ENST00000446623 COL23A1Q86Y22 540 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P36-201ENST00000446623 C5P01031 1676 aa8.23□□□□□ -1.09
HMGN1P36-201ENST00000446623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 SLC4A3P48751 1232 aa8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 MSL1Q68DK7 614 aa8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 CARD11Q9BXL7 1154 aa8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 MAP3K19Q56UN5 1328 aa8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 USP47Q96K76 1375 aa8.22□□□□□ -1.09
HMGN1P36-201ENST00000446623 SLC24A1O60721 1099 aa8.21□□□□□ -1.1
HMGN1P36-201ENST00000446623 FBLN1P23142 703 aa8.21□□□□□ -1.1
HMGN1P36-201ENST00000446623 HOXC9P31274 260 aa8.21□□□□□ -1.1
HMGN1P36-201ENST00000446623 PHOX2BQ99453 314 aa8.21□□□□□ -1.1
HMGN1P36-201ENST00000446623 ADCY9O60503 1353 aa8.21□□□□□ -1.1
HMGN1P36-201ENST00000446623 TAF1LQ8IZX4 1826 aa8.2□□□□□ -1.1
HMGN1P36-201ENST00000446623 AMPHP49418 695 aa8.2□□□□□ -1.1
HMGN1P36-201ENST00000446623 COG3Q96JB2 828 aa8.2□□□□□ -1.1
HMGN1P36-201ENST00000446623 PUS7Q96PZ0 661 aaKnown RBP8.2□□□□□ -1.1
HMGN1P36-201ENST00000446623 CD2APQ9Y5K6 639 aa8.2□□□□□ -1.1
HMGN1P36-201ENST00000446623 RTL1A6NKG5 1358 aa8.2□□□□□ -1.1
HMGN1P36-201ENST00000446623 ITGBL1O95965 494 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 KCNC4Q03721 635 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 NBPF6Q5VWK0 638 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 USHBP1Q8N6Y0 703 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 NBPF4Q96M43 638 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 MTRQ99707 1265 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 GPBP1L1Q9HC44 474 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 TOGARAM1Q9Y4F4 1720 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 CGNL1Q0VF96 1302 aa8.19□□□□□ -1.1
HMGN1P36-201ENST00000446623 C4BP0C0L5 1744 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 SLC10A3P09131 477 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 HSPA6P17066 643 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 COPS2P61201 443 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 MAP2K5Q13163 448 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 TJAP1Q5JTD0 557 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 FLAD1Q8NFF5 587 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 PALLDQ8WX93 1383 aa8.18□□□□□ -1.1
HMGN1P36-201ENST00000446623 ITGB4P16144 1822 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 CFHP08603 1231 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 RRS1Q15050 365 aaKnown RBP8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 ZNF526Q8TF50 670 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 RAPGEF4Q8WZA2 1011 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 TESK2Q96S53 571 aa8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 SMG6Q86US8 1419 aaKnown RBP8.17□□□□□ -1.1
HMGN1P36-201ENST00000446623 DDX11L8A8MPP1 907 aa8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 IRF6O14896 467 aa8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 HMGB2P26583 209 aaKnown RBP8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 MPRIPQ6WCQ1 1025 aa8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 AMIGO3Q86WK7 504 aa8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 PCDH11XQ9BZA7 1347 aa8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 PCDH11YQ9BZA8 1340 aa8.16□□□□□ -1.1
HMGN1P36-201ENST00000446623 INSRP06213 1382 aa8.15□□□□□ -1.1
HMGN1P36-201ENST00000446623 IGSF1Q8N6C5 1336 aa8.15□□□□□ -1.1
HMGN1P36-201ENST00000446623 ST20-MTHFSA0A0A6YYL1 179 aa8.15□□□□□ -1.1
HMGN1P36-201ENST00000446623 FYB1O15117 783 aa8.15□□□□□ -1.1
HMGN1P36-201ENST00000446623 CYP27B1O15528 508 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms