RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 COL15A1P39059 1388 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 SOS1Q07889 1333 aaPredicted RBP9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 TRIM27P14373 513 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 CWF19L2Q2TBE0 894 aaKnown RBP9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 ALDH1L2Q3SY69 923 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 KIF6Q6ZMV9 814 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 ARHGEF1Q92888 912 aaKnown RBP9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 AKT1S1Q96B36 256 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 HYPKQ9NX55 129 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 STK32BQ9NY57 414 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 COG6Q9Y2V7 657 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 ADCY9O60503 1353 aa9.63□□□□□ -0.87
SF3A3P1-201ENST00000446317 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 NUP188Q5SRE5 1749 aa9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 RPS6KA4O75676 772 aa9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 EIF5P55010 431 aaKnown RBP9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 COL23A1Q86Y22 540 aaPredicted RBP9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 FTSJ3Q8IY81 847 aaKnown RBP9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
SF3A3P1-201ENST00000446317 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 CT47B1P0C2W7 299 aaPredicted RBP9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 RFC4P35249 363 aa9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 ITPRIPQ8IWB1 547 aa9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 PNPLA7Q6ZV29 1317 aa9.61□□□□□ -0.87
SF3A3P1-201ENST00000446317 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 IL6STP40189 918 aaPredicted RBP9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 FKBP8Q14318 412 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 SLC15A2Q16348 729 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 ATF7IPQ6VMQ6 1270 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 EXOC6Q8TAG9 804 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 RREB1Q92766 1687 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 MAP3K15Q6ZN16 1313 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 KIF16BQ96L93 1317 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 TUBGCP6Q96RT7 1819 aa9.6□□□□□ -0.87
SF3A3P1-201ENST00000446317 ZPR1O75312 459 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 CAMTA2O94983 1202 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 KSR2Q6VAB6 950 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 SYNE4Q8N205 404 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 BCL2L12Q9HB09 334 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 DDX58O95786 925 aaKnown RBP9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 CCDC125Q86Z20 511 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 PLBD2Q8NHP8 589 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 API5Q9BZZ5 524 aaKnown RBP9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 ATF5Q9Y2D1 282 aaPredicted RBP9.59□□□□□ -0.87
SF3A3P1-201ENST00000446317 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 IPO8O15397 1037 aaKnown RBP9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 IGKV5-2P06315 115 aa9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 NUTM1Q86Y26 1132 aa9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
SF3A3P1-201ENST00000446317 ARFGEF2Q9Y6D5 1785 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 PTPRCP08575 1304 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 USP42Q9H9J4 1324 aaKnown RBP9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 C4AP0C0L4 1744 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 CICQ96RK0 1608 aaPredicted RBP9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 GYS1P13807 737 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 BEND3Q5T5X7 828 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 MEIS3Q99687 375 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 NARFQ9UHQ1 456 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 ABCC4O15439 1325 aa9.57□□□□□ -0.88
SF3A3P1-201ENST00000446317 ZNF831Q5JPB2 1677 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 A0A087WZG4 1122 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 NEFLP07196 543 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 SSFA2P28290 1259 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 FAM89AQ96GI7 184 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 RGPD3A6NKT7 1758 aaPredicted RBP9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 RGPD4Q7Z3J3 1758 aa9.56□□□□□ -0.88
SF3A3P1-201ENST00000446317 NEURL1BA8MQ27 555 aa9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 NPHP1O15259 732 aa9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 HCLS1P14317 486 aaPredicted RBP9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 NEXNQ0ZGT2 675 aa9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 TCIRG1Q13488 830 aa9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 NFIXQ14938 502 aa9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
SF3A3P1-201ENST00000446317 NBPF7P0C2Y1 421 aaPredicted RBP9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 DDR1Q08345 913 aa9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 MVPQ14764 893 aaKnown RBP9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms