RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SKILP12757 684 aa21.54■■□□□ 1.04
SHANK3-203ENST00000445220 SPECC1Q5M775 1068 aa21.54■■□□□ 1.04
SHANK3-203ENST00000445220 CCDC186Q7Z3E2 898 aa21.54■■□□□ 1.04
SHANK3-203ENST00000445220 NUP88Q99567 741 aaPredicted RBP21.54■■□□□ 1.04
SHANK3-203ENST00000445220 BCCIPQ9P287 314 aaKnown RBP eCLIP21.54■■□□□ 1.04
SHANK3-203ENST00000445220 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
SHANK3-203ENST00000445220 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
SHANK3-203ENST00000445220 ADGRF5Q8IZF2 1346 aa21.54■■□□□ 1.04
SHANK3-203ENST00000445220 FAM200AQ8TCP9 573 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 MYL6BP14649 208 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 CPLX3Q8WVH0 158 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 C8orf76Q96K31 380 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 HSPA4P34932 840 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 GIMAP6Q6P9H5 292 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 DDX54Q8TDD1 881 aaKnown RBP21.53■■□□□ 1.04
SHANK3-203ENST00000445220 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
SHANK3-203ENST00000445220 IGHDP01880 384 aa21.53■■□□□ 1.04
SHANK3-203ENST00000445220 SOGA3Q5TF21 947 aa21.52■■□□□ 1.04
SHANK3-203ENST00000445220 GJB2P29033 226 aa21.52■■□□□ 1.04
SHANK3-203ENST00000445220 TTC31Q49AM3 519 aaPredicted RBP21.52■■□□□ 1.04
SHANK3-203ENST00000445220 WAPLQ7Z5K2 1190 aa21.52■■□□□ 1.04
SHANK3-203ENST00000445220 NGLY1Q96IV0 654 aa21.52■■□□□ 1.04
SHANK3-203ENST00000445220 SNX21Q969T3 373 aa21.52■■□□□ 1.04
SHANK3-203ENST00000445220 TTC12Q9H892 705 aaPredicted RBP21.52■■□□□ 1.04
SHANK3-203ENST00000445220 AMOTQ4VCS5 1084 aa21.52■■□□□ 1.03
SHANK3-203ENST00000445220 IKQ13123 557 aaPredicted RBP21.51■■□□□ 1.03
SHANK3-203ENST00000445220 ZSWIM4Q9H7M6 989 aa21.51■■□□□ 1.03
SHANK3-203ENST00000445220 MPHOSPH8Q99549 860 aa21.51■■□□□ 1.03
SHANK3-203ENST00000445220 UBAC1Q9BSL1 405 aa21.51■■□□□ 1.03
SHANK3-203ENST00000445220 TFIP11Q9UBB9 837 aaKnown RBP21.51■■□□□ 1.03
SHANK3-203ENST00000445220 CAPN2P17655 700 aa21.51■■□□□ 1.03
SHANK3-203ENST00000445220 HMGB1P09429 215 aaKnown RBP21.51■■□□□ 1.03
SHANK3-203ENST00000445220 HLTFQ14527 1009 aaKnown RBP eCLIP21.51■■□□□ 1.033e-10■■■□□ 15.1
SHANK3-203ENST00000445220 CNNM3Q8NE01 707 aa21.51■■□□□ 1.03
SHANK3-203ENST00000445220 RASSF4Q9H2L5 321 aa21.51■■□□□ 1.03
SHANK3-203ENST00000445220 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
SHANK3-203ENST00000445220 ALS2CR12Q96Q35 445 aa21.5■■□□□ 1.03
SHANK3-203ENST00000445220 CCDC178Q5BJE1 867 aa21.5■■□□□ 1.03
SHANK3-203ENST00000445220 RRAGDQ9NQL2 400 aaPredicted RBP21.5■■□□□ 1.03
SHANK3-203ENST00000445220 CACNA2D4Q7Z3S7 1137 aa21.5■■□□□ 1.03
SHANK3-203ENST00000445220 C14orf93Q9H972 538 aaKnown RBP21.5■■□□□ 1.03
SHANK3-203ENST00000445220 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
SHANK3-203ENST00000445220 DNAI1Q9UI46 699 aa21.5■■□□□ 1.03
SHANK3-203ENST00000445220 PRIM1P49642 420 aaKnown RBP21.49■■□□□ 1.03
SHANK3-203ENST00000445220 SAMD1Q6SPF0 538 aaPredicted RBP21.49■■□□□ 1.03
SHANK3-203ENST00000445220 MICALL1Q8N3F8 863 aa21.49■■□□□ 1.03
SHANK3-203ENST00000445220 FKBP4Q02790 459 aaKnown RBP eCLIP21.49■■□□□ 1.031e-6■■□□□ 13.7
SHANK3-203ENST00000445220 MCM6Q14566 821 aa21.49■■□□□ 1.03
SHANK3-203ENST00000445220 SSBP05455 408 aaKnown RBP eCLIP21.49■■□□□ 1.03
SHANK3-203ENST00000445220 C8orf34Q49A92 452 aa21.49■■□□□ 1.03
SHANK3-203ENST00000445220 IDI1Q13907 227 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 MAATS1Q7Z4T9 603 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 HSF2BPO75031 334 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 VPS36Q86VN1 386 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 CEP112Q8N8E3 955 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 EHBP1Q8NDI1 1231 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 BIN1O00499 593 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 ZSCAN22P10073 491 aaPredicted RBP21.48■■□□□ 1.03
SHANK3-203ENST00000445220 LARP1Q6PKG0 1096 aaKnown RBP21.48■■□□□ 1.03
SHANK3-203ENST00000445220 GOPCQ9HD26 462 aa21.48■■□□□ 1.03
SHANK3-203ENST00000445220 IGSF3O75054 1194 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 CETN2P41208 172 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 CTAGE15A4D2H0 777 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 CTAGE8P0CG41 777 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 CTAGE6Q86UF2 777 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 CTAGE4Q8IX94 777 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 FANCAO15360 1455 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 TMX3Q96JJ7 454 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 NOS1P29475 1434 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
SHANK3-203ENST00000445220 ADAMTS2O95450 1211 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 TRIM27P14373 513 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 LIG1P18858 919 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 MCM10Q7L590 875 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 NME9Q86XW9 330 aa21.47■■□□□ 1.03
SHANK3-203ENST00000445220 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
SHANK3-203ENST00000445220 CKAP4Q07065 602 aaKnown RBP21.46■■□□□ 1.03
SHANK3-203ENST00000445220 TTC21BQ7Z4L5 1316 aa21.46■■□□□ 1.03
SHANK3-203ENST00000445220 THUMPD2Q9BTF0 503 aaKnown RBP21.46■■□□□ 1.03
SHANK3-203ENST00000445220 RAB3GAP1Q15042 981 aa21.45■■□□□ 1.03
SHANK3-203ENST00000445220 EBAG9O00559 213 aa21.45■■□□□ 1.02
SHANK3-203ENST00000445220 GUCY1B3Q02153 619 aa21.45■■□□□ 1.02
SHANK3-203ENST00000445220 TERF1P54274 439 aa21.45■■□□□ 1.02
SHANK3-203ENST00000445220 ANO6Q4KMQ2 910 aa21.45■■□□□ 1.02
SHANK3-203ENST00000445220 IL16Q14005 1332 aa21.45■■□□□ 1.02
SHANK3-203ENST00000445220 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.02
SHANK3-203ENST00000445220 C10orf67Q8IYJ2 551 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 GSTTP1A0A1W2PQM5 241 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 PTPRCP08575 1304 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 ANKRD36BQ8N2N9 1353 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 FGFR1OPO95684 399 aaKnown RBP21.44■■□□□ 1.02
SHANK3-203ENST00000445220 STARD3NLO95772 234 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.44■■□□□ 1.022e-6■■■□□ 15.7
SHANK3-203ENST00000445220 V9GYY5 206 aaPredicted RBP21.44■■□□□ 1.02
SHANK3-203ENST00000445220 TDO2P48775 406 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 DNA2P51530 1060 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 TUBB4BP68371 445 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 USP48Q86UV5 1035 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 TAOK3Q9H2K8 898 aa21.44■■□□□ 1.02
SHANK3-203ENST00000445220 TTC22Q5TAA0 569 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms