RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
GARNL3-208ENST00000444677 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
GARNL3-208ENST00000444677 PRR5LQ6MZQ0 368 aa17.61■□□□□ 0.41
GARNL3-208ENST00000444677 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
GARNL3-208ENST00000444677 TSR2Q969E8 191 aaKnown RBP17.61■□□□□ 0.41
GARNL3-208ENST00000444677 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
GARNL3-208ENST00000444677 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
GARNL3-208ENST00000444677 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
GARNL3-208ENST00000444677 CLEC4GQ6UXB4 293 aa17.6■□□□□ 0.41
GARNL3-208ENST00000444677 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
GARNL3-208ENST00000444677 MAP3K15Q6ZN16 1313 aa17.59■□□□□ 0.41
GARNL3-208ENST00000444677 AIMP1Q12904 312 aaKnown RBP17.59■□□□□ 0.41
GARNL3-208ENST00000444677 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
GARNL3-208ENST00000444677 ZNF784Q8NCA9 323 aaPredicted RBP17.59■□□□□ 0.41
GARNL3-208ENST00000444677 XAGE3Q8WTP9 111 aa17.59■□□□□ 0.41
GARNL3-208ENST00000444677 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
GARNL3-208ENST00000444677 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
GARNL3-208ENST00000444677 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
GARNL3-208ENST00000444677 ERVV-1B6SEH8 477 aa17.58■□□□□ 0.4
GARNL3-208ENST00000444677 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
GARNL3-208ENST00000444677 KIF6Q6ZMV9 814 aa17.58■□□□□ 0.4
GARNL3-208ENST00000444677 COPS6Q7L5N1 327 aa17.58■□□□□ 0.4
GARNL3-208ENST00000444677 TSPYL6Q8N831 410 aa17.58■□□□□ 0.4
GARNL3-208ENST00000444677 ZNF652Q9Y2D9 606 aa17.58■□□□□ 0.4
GARNL3-208ENST00000444677 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
GARNL3-208ENST00000444677 GPTP24298 496 aa17.57■□□□□ 0.4
GARNL3-208ENST00000444677 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
GARNL3-208ENST00000444677 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-208ENST00000444677 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
GARNL3-208ENST00000444677 SCN7AQ01118 1682 aa17.56■□□□□ 0.4
GARNL3-208ENST00000444677 HOXB7P09629 217 aa17.56■□□□□ 0.4
GARNL3-208ENST00000444677 NBPF5PQ86XG9 351 aaPredicted RBP17.56■□□□□ 0.4
GARNL3-208ENST00000444677 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
GARNL3-208ENST00000444677 PIM2Q9P1W9 311 aa17.56■□□□□ 0.4
GARNL3-208ENST00000444677 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
GARNL3-208ENST00000444677 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
GARNL3-208ENST00000444677 TCERG1O14776 1098 aaKnown RBP17.54■□□□□ 0.4
GARNL3-208ENST00000444677 RGL2O15211 777 aa17.54■□□□□ 0.4
GARNL3-208ENST00000444677 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
GARNL3-208ENST00000444677 BRIP1Q9BX63 1249 aa17.54■□□□□ 0.4
GARNL3-208ENST00000444677 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
GARNL3-208ENST00000444677 IL16Q14005 1332 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 NPHP1O15259 732 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 DALRD3Q5D0E6 543 aaKnown RBP17.53■□□□□ 0.4
GARNL3-208ENST00000444677 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
GARNL3-208ENST00000444677 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 MIER1Q8N108 512 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
GARNL3-208ENST00000444677 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
GARNL3-208ENST00000444677 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
GARNL3-208ENST00000444677 H0YIN7 160 aa17.52■□□□□ 0.4
GARNL3-208ENST00000444677 ST5P78524 1137 aa17.52■□□□□ 0.4
GARNL3-208ENST00000444677 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.4
GARNL3-208ENST00000444677 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
GARNL3-208ENST00000444677 ZNF428Q96B54 188 aa17.52■□□□□ 0.4
GARNL3-208ENST00000444677 BCORQ6W2J9 1755 aa17.52■□□□□ 0.4
GARNL3-208ENST00000444677 PDE6BP35913 854 aa17.51■□□□□ 0.39
GARNL3-208ENST00000444677 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
GARNL3-208ENST00000444677 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.39
GARNL3-208ENST00000444677 NRXN2Q9P2S2 1712 aa17.51■□□□□ 0.39
GARNL3-208ENST00000444677 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
GARNL3-208ENST00000444677 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
GARNL3-208ENST00000444677 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
GARNL3-208ENST00000444677 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
GARNL3-208ENST00000444677 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
GARNL3-208ENST00000444677 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
GARNL3-208ENST00000444677 TWISTNBQ3B726 338 aaPredicted RBP17.49■□□□□ 0.39
GARNL3-208ENST00000444677 TTLL6Q8N841 843 aa17.49■□□□□ 0.39
GARNL3-208ENST00000444677 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
GARNL3-208ENST00000444677 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
GARNL3-208ENST00000444677 NTSR2O95665 410 aa17.48■□□□□ 0.39
GARNL3-208ENST00000444677 TCIRG1Q13488 830 aa17.48■□□□□ 0.39
GARNL3-208ENST00000444677 ANKRD13DQ6ZTN6 518 aa17.48■□□□□ 0.39
GARNL3-208ENST00000444677 PLBD2Q8NHP8 589 aa17.48■□□□□ 0.39
GARNL3-208ENST00000444677 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
GARNL3-208ENST00000444677 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
GARNL3-208ENST00000444677 KLRG2A4D1S0 409 aaPredicted RBP17.47■□□□□ 0.39
GARNL3-208ENST00000444677 SRGNP10124 158 aa17.47■□□□□ 0.39
GARNL3-208ENST00000444677 CCDC30Q5VVM6 783 aa17.47■□□□□ 0.39
GARNL3-208ENST00000444677 NLRP10Q86W26 655 aa17.47■□□□□ 0.39
GARNL3-208ENST00000444677 SYNE4Q8N205 404 aa17.47■□□□□ 0.39
GARNL3-208ENST00000444677 CACNA1SQ13698 1873 aa17.46■□□□□ 0.39
GARNL3-208ENST00000444677 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
GARNL3-208ENST00000444677 VAMP4O75379 141 aa17.46■□□□□ 0.39
GARNL3-208ENST00000444677 C3orf67Q6ZVT6 689 aa17.46■□□□□ 0.39
GARNL3-208ENST00000444677 G2E3Q7L622 706 aa17.46■□□□□ 0.39
GARNL3-208ENST00000444677 NYXQ9GZU5 481 aa17.46■□□□□ 0.39
GARNL3-208ENST00000444677 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.38
GARNL3-208ENST00000444677 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
GARNL3-208ENST00000444677 PARP10Q53GL7 1025 aa17.45■□□□□ 0.38
GARNL3-208ENST00000444677 MASTLQ96GX5 879 aa17.45■□□□□ 0.38
GARNL3-208ENST00000444677 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
GARNL3-208ENST00000444677 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
GARNL3-208ENST00000444677 ADCY9O60503 1353 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 C21orf2O43822 256 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 RASSF7Q02833 373 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 HSP90AB3PQ58FF7 597 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms