RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 IL16Q14005 1332 aa23.47■■□□□ 1.35
LRCH1-204ENST00000443945 ERBB4Q15303 1308 aa23.47■■□□□ 1.35
LRCH1-204ENST00000443945 AIMP1Q12904 312 aaKnown RBP23.47■■□□□ 1.35
LRCH1-204ENST00000443945 CCDC24Q8N4L8 307 aa23.47■■□□□ 1.35
LRCH1-204ENST00000443945 SERPINB2P05120 415 aa23.47■■□□□ 1.35
LRCH1-204ENST00000443945 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
LRCH1-204ENST00000443945 HOXB7P09629 217 aa23.46■■□□□ 1.35
LRCH1-204ENST00000443945 C10orf71Q711Q0 1435 aa23.45■■□□□ 1.35
LRCH1-204ENST00000443945 AFDNP55196 1824 aaKnown RBP23.45■■□□□ 1.34
LRCH1-204ENST00000443945 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.34
LRCH1-204ENST00000443945 COPS6Q7L5N1 327 aa23.45■■□□□ 1.34
LRCH1-204ENST00000443945 XAGE3Q8WTP9 111 aa23.45■■□□□ 1.34
LRCH1-204ENST00000443945 DDX21Q9NR30 783 aaKnown RBP eCLIP23.45■■□□□ 1.34
LRCH1-204ENST00000443945 ZNF521Q96K83 1311 aa23.44■■□□□ 1.34
LRCH1-204ENST00000443945 KIF6Q6ZMV9 814 aa23.44■■□□□ 1.34
LRCH1-204ENST00000443945 MAP3K15Q6ZN16 1313 aa23.44■■□□□ 1.34
LRCH1-204ENST00000443945 FAM177BA6PVY3 158 aa23.44■■□□□ 1.34
LRCH1-204ENST00000443945 SETDB2Q96T68 719 aa23.44■■□□□ 1.34
LRCH1-204ENST00000443945 CARMIL3Q8ND23 1372 aa23.43■■□□□ 1.34
LRCH1-204ENST00000443945 ZNF652Q9Y2D9 606 aa23.43■■□□□ 1.34
LRCH1-204ENST00000443945 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
LRCH1-204ENST00000443945 NIP7Q9Y221 180 aaKnown RBP eCLIP23.42■■□□□ 1.34
LRCH1-204ENST00000443945 EXOSC9Q06265 439 aaKnown RBP23.42■■□□□ 1.34
LRCH1-204ENST00000443945 TWISTNBQ3B726 338 aaPredicted RBP23.42■■□□□ 1.34
LRCH1-204ENST00000443945 CLEC4GQ6UXB4 293 aa23.42■■□□□ 1.34
LRCH1-204ENST00000443945 DBF4Q9UBU7 674 aaPredicted RBP23.42■■□□□ 1.34
LRCH1-204ENST00000443945 N4BP2Q86UW6 1770 aaPredicted RBP23.41■■□□□ 1.34
LRCH1-204ENST00000443945 PXDNLA1KZ92 1463 aa23.41■■□□□ 1.34
LRCH1-204ENST00000443945 KIF13BQ9NQT8 1826 aa23.41■■□□□ 1.34
LRCH1-204ENST00000443945 GPTP24298 496 aa23.4■■□□□ 1.34
LRCH1-204ENST00000443945 NUP98P52948 1817 aa23.4■■□□□ 1.34
LRCH1-204ENST00000443945 GPR162Q16538 588 aa23.4■■□□□ 1.34
LRCH1-204ENST00000443945 ZNF428Q96B54 188 aa23.4■■□□□ 1.34
LRCH1-204ENST00000443945 PHAXQ9H814 394 aaKnown RBP23.4■■□□□ 1.34
LRCH1-204ENST00000443945 KIAA1551Q9HCM1 1747 aa23.39■■□□□ 1.34
LRCH1-204ENST00000443945 NRXN2Q9P2S2 1712 aa23.39■■□□□ 1.34
LRCH1-204ENST00000443945 DPEP1P16444 411 aa23.39■■□□□ 1.34
LRCH1-204ENST00000443945 CHRNA5P30532 468 aa23.39■■□□□ 1.34
LRCH1-204ENST00000443945 GOLGA2Q08379 1002 aa23.39■■□□□ 1.34
LRCH1-204ENST00000443945 ERVV-1B6SEH8 477 aa23.39■■□□□ 1.33
LRCH1-204ENST00000443945 NPHP1O15259 732 aa23.39■■□□□ 1.33
LRCH1-204ENST00000443945 YBX3P16989 372 aaKnown RBP eCLIP23.39■■□□□ 1.33
LRCH1-204ENST00000443945 PRR5LQ6MZQ0 368 aa23.39■■□□□ 1.33
LRCH1-204ENST00000443945 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
LRCH1-204ENST00000443945 NBPF5PQ86XG9 351 aaPredicted RBP23.37■■□□□ 1.33
LRCH1-204ENST00000443945 CNBD1Q8NA66 436 aa23.37■■□□□ 1.33
LRCH1-204ENST00000443945 MYH16Q9H6N6 1097 aa23.37■■□□□ 1.33
LRCH1-204ENST00000443945 UBN2Q6ZU65 1347 aa23.37■■□□□ 1.33
LRCH1-204ENST00000443945 CCDC30Q5VVM6 783 aa23.36■■□□□ 1.33
LRCH1-204ENST00000443945 GIGYF2Q6Y7W6 1299 aaKnown RBP23.36■■□□□ 1.33
LRCH1-204ENST00000443945 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
LRCH1-204ENST00000443945 DCAF8L1A6NGE4 600 aa23.36■■□□□ 1.33
LRCH1-204ENST00000443945 TGFB2P61812 414 aa23.36■■□□□ 1.33
LRCH1-204ENST00000443945 KCNA3P22001 575 aa23.34■■□□□ 1.33
LRCH1-204ENST00000443945 ATP10DQ9P241 1426 aa23.33■■□□□ 1.33
LRCH1-204ENST00000443945 VAMP4O75379 141 aa23.33■■□□□ 1.33
LRCH1-204ENST00000443945 ANKRD13DQ6ZTN6 518 aa23.33■■□□□ 1.33
LRCH1-204ENST00000443945 NUTM1Q86Y26 1132 aa23.33■■□□□ 1.33
LRCH1-204ENST00000443945 ANKRD31Q8N7Z5 1873 aa23.33■■□□□ 1.32
LRCH1-204ENST00000443945 ZNF34Q8IZ26 560 aa23.32■■□□□ 1.32
LRCH1-204ENST00000443945 RGL2O15211 777 aa23.32■■□□□ 1.32
LRCH1-204ENST00000443945 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
LRCH1-204ENST00000443945 SUSD4Q5VX71 490 aa23.32■■□□□ 1.32
LRCH1-204ENST00000443945 G2E3Q7L622 706 aa23.31■■□□□ 1.32
LRCH1-204ENST00000443945 STK31Q9BXU1 1019 aa23.31■■□□□ 1.32
LRCH1-204ENST00000443945 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
LRCH1-204ENST00000443945 SLFN5Q08AF3 891 aa23.31■■□□□ 1.32
LRCH1-204ENST00000443945 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
LRCH1-204ENST00000443945 BCS1LQ9Y276 419 aa23.31■■□□□ 1.32
LRCH1-204ENST00000443945 ST5P78524 1137 aa23.3■■□□□ 1.32
LRCH1-204ENST00000443945 TPTE2Q6XPS3 522 aa23.3■■□□□ 1.32
LRCH1-204ENST00000443945 C2CD5Q86YS7 1000 aa23.3■■□□□ 1.32
LRCH1-204ENST00000443945 E9PSI1 815 aa23.29■■□□□ 1.32
LRCH1-204ENST00000443945 ATP5J2-PTCD1G3V325 749 aa23.29■■□□□ 1.32
LRCH1-204ENST00000443945 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
LRCH1-204ENST00000443945 BRIP1Q9BX63 1249 aa23.29■■□□□ 1.32
LRCH1-204ENST00000443945 ABCC12Q96J65 1359 aa23.29■■□□□ 1.32
LRCH1-204ENST00000443945 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
LRCH1-204ENST00000443945 ERFEQ4G0M1 354 aa23.28■■□□□ 1.32
LRCH1-204ENST00000443945 RIC3Q7Z5B4 369 aa23.28■■□□□ 1.32
LRCH1-204ENST00000443945 BRCA1P38398 1863 aaKnown RBP23.27■■□□□ 1.32
LRCH1-204ENST00000443945 COL11A2P13942 1736 aaPredicted RBP23.27■■□□□ 1.32
LRCH1-204ENST00000443945 NTSR2O95665 410 aa23.27■■□□□ 1.32
LRCH1-204ENST00000443945 PIM2Q9P1W9 311 aa23.27■■□□□ 1.32
LRCH1-204ENST00000443945 ANKRD36CQ5JPF3 1778 aa23.27■■□□□ 1.32
LRCH1-204ENST00000443945 ARFGEF2Q9Y6D5 1785 aa23.27■■□□□ 1.32
LRCH1-204ENST00000443945 NLRP10Q86W26 655 aa23.26■■□□□ 1.31
LRCH1-204ENST00000443945 SYNE4Q8N205 404 aa23.26■■□□□ 1.31
LRCH1-204ENST00000443945 H0YIN7 160 aa23.26■■□□□ 1.31
LRCH1-204ENST00000443945 PDE6BP35913 854 aa23.25■■□□□ 1.31
LRCH1-204ENST00000443945 ZNF622Q969S3 477 aaKnown RBP eCLIP23.25■■□□□ 1.31
LRCH1-204ENST00000443945 CHMP4AQ9BY43 222 aa23.25■■□□□ 1.31
LRCH1-204ENST00000443945 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
LRCH1-204ENST00000443945 HSP90AB3PQ58FF7 597 aa23.24■■□□□ 1.31
LRCH1-204ENST00000443945 NYXQ9GZU5 481 aa23.24■■□□□ 1.31
LRCH1-204ENST00000443945 PARP10Q53GL7 1025 aa23.24■■□□□ 1.31
LRCH1-204ENST00000443945 MAP3K2Q9Y2U5 619 aa23.24■■□□□ 1.31
LRCH1-204ENST00000443945 PI4KAP2A4QPH2 592 aa23.23■■□□□ 1.31
LRCH1-204ENST00000443945 DALRD3Q5D0E6 543 aaKnown RBP23.23■■□□□ 1.31
LRCH1-204ENST00000443945 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms