RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 TIGD1Q96MW7 591 aa18.15■□□□□ 0.5
CHFR-204ENST00000443047 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
CHFR-204ENST00000443047 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
CHFR-204ENST00000443047 CCDC66A2RUB6 948 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 KDM4AO75164 1064 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 KIF24Q5T7B8 1368 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 HDGFL1Q5TGJ6 251 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 CASC1Q6TDU7 716 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 ZNF592Q92610 1267 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 UVSSAQ2YD98 709 aa18.14■□□□□ 0.49
CHFR-204ENST00000443047 SDSP20132 328 aa18.13■□□□□ 0.49
CHFR-204ENST00000443047 GABPB1Q06547 395 aaPredicted RBP18.13■□□□□ 0.49
CHFR-204ENST00000443047 CHD2O14647 1828 aaKnown RBP18.13■□□□□ 0.49
CHFR-204ENST00000443047 BRD1O95696 1058 aa18.12■□□□□ 0.49
CHFR-204ENST00000443047 GCP02774 474 aa18.12■□□□□ 0.49
CHFR-204ENST00000443047 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
CHFR-204ENST00000443047 AXIN2Q9Y2T1 843 aa18.12■□□□□ 0.49
CHFR-204ENST00000443047 CTIFO43310 598 aaKnown RBP18.12■□□□□ 0.49
CHFR-204ENST00000443047 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
CHFR-204ENST00000443047 LRRFIP2Q9Y608 721 aaKnown RBP18.12■□□□□ 0.49
CHFR-204ENST00000443047 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
CHFR-204ENST00000443047 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHFR-204ENST00000443047 V9GYY5 206 aaPredicted RBP18.12■□□□□ 0.49
CHFR-204ENST00000443047 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
CHFR-204ENST00000443047 GNAI2P04899 355 aa18.11■□□□□ 0.49
CHFR-204ENST00000443047 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
CHFR-204ENST00000443047 TERF2Q15554 542 aa18.11■□□□□ 0.49
CHFR-204ENST00000443047 LTN1O94822 1766 aa18.11■□□□□ 0.49
CHFR-204ENST00000443047 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
CHFR-204ENST00000443047 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
CHFR-204ENST00000443047 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
CHFR-204ENST00000443047 AP5Z1O43299 807 aa18.1■□□□□ 0.49
CHFR-204ENST00000443047 ZBTB9Q96C00 473 aa18.1■□□□□ 0.49
CHFR-204ENST00000443047 DDX41Q9UJV9 622 aaKnown RBP18.1■□□□□ 0.49
CHFR-204ENST00000443047 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
CHFR-204ENST00000443047 PTGS1P23219 599 aa18.1■□□□□ 0.49
CHFR-204ENST00000443047 RGPD2P0DJD1 1756 aa18.1■□□□□ 0.49
CHFR-204ENST00000443047 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
CHFR-204ENST00000443047 NPHP1O15259 732 aa18.09■□□□□ 0.49
CHFR-204ENST00000443047 DRC7Q8IY82 874 aa18.09■□□□□ 0.49
CHFR-204ENST00000443047 DNAJC2Q99543 621 aaKnown RBP18.09■□□□□ 0.49
CHFR-204ENST00000443047 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
CHFR-204ENST00000443047 CCDC183Q5T5S1 534 aa18.09■□□□□ 0.49
CHFR-204ENST00000443047 ST7Q9NRC1 585 aa18.09■□□□□ 0.49
CHFR-204ENST00000443047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.08■□□□□ 0.49
CHFR-204ENST00000443047 REC8O95072 547 aa18.08■□□□□ 0.49
CHFR-204ENST00000443047 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.49
CHFR-204ENST00000443047 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.48
CHFR-204ENST00000443047 DTNBO60941 627 aa18.08■□□□□ 0.48
CHFR-204ENST00000443047 HMMRO75330 724 aa18.08■□□□□ 0.48
CHFR-204ENST00000443047 USP44Q9H0E7 712 aa18.08■□□□□ 0.48
CHFR-204ENST00000443047 CNPY2Q9Y2B0 182 aa18.08■□□□□ 0.48
CHFR-204ENST00000443047 TNNT1P13805 278 aa18.07■□□□□ 0.48
CHFR-204ENST00000443047 LRMPQ12912 555 aa18.07■□□□□ 0.48
CHFR-204ENST00000443047 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
CHFR-204ENST00000443047 IL1RAPL2Q9NP60 686 aa18.07■□□□□ 0.48
CHFR-204ENST00000443047 NFAT5O94916 1531 aa18.07■□□□□ 0.48
CHFR-204ENST00000443047 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
CHFR-204ENST00000443047 TEFQ10587 303 aa18.07■□□□□ 0.48
CHFR-204ENST00000443047 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
CHFR-204ENST00000443047 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 CCDC112Q8NEF3 446 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 KIF18AQ8NI77 898 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 CHMP3Q9Y3E7 222 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 GOLGA6L6A8MZA4 724 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 FIBPO43427 364 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 KRT222Q8N1A0 295 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 CAPN2P17655 700 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 MX1P20591 662 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 PDE1AP54750 535 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
CHFR-204ENST00000443047 CABLES1Q8TDN4 633 aa18.05■□□□□ 0.48
CHFR-204ENST00000443047 PI4KAP2A4QPH2 592 aa18.04■□□□□ 0.48
CHFR-204ENST00000443047 ERC2O15083 957 aa18.04■□□□□ 0.48
CHFR-204ENST00000443047 NBPF7P0C2Y1 421 aaPredicted RBP18.04■□□□□ 0.48
CHFR-204ENST00000443047 PI4KAP1Q8N8J0 262 aa18.04■□□□□ 0.48
CHFR-204ENST00000443047 MORC2Q9Y6X9 1032 aaPredicted RBP18.04■□□□□ 0.48
CHFR-204ENST00000443047 PXDNQ92626 1479 aa18.04■□□□□ 0.48
CHFR-204ENST00000443047 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
CHFR-204ENST00000443047 CCDC186Q7Z3E2 898 aa18.04■□□□□ 0.48
CHFR-204ENST00000443047 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
CHFR-204ENST00000443047 GNAI3P08754 354 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
CHFR-204ENST00000443047 CEMIPQ8WUJ3 1361 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
CHFR-204ENST00000443047 TPD52L1Q16890 204 aaPredicted RBP18.03■□□□□ 0.48
CHFR-204ENST00000443047 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 LRRCC1Q9C099 1032 aa18.03■□□□□ 0.48
CHFR-204ENST00000443047 PLEKHO1Q53GL0 409 aaPredicted RBP18.02■□□□□ 0.48
CHFR-204ENST00000443047 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.48
CHFR-204ENST00000443047 NRBP1Q9UHY1 535 aa18.02■□□□□ 0.47
CHFR-204ENST00000443047 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
CHFR-204ENST00000443047 TNNT3P45378 269 aaPredicted RBP18.01■□□□□ 0.47
CHFR-204ENST00000443047 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms