RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
TM9SF4-204ENST00000442842 QSER1Q2KHR3 1735 aa17.31■□□□□ 0.36
TM9SF4-204ENST00000442842 ZPR1O75312 459 aa17.31■□□□□ 0.36
TM9SF4-204ENST00000442842 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
TM9SF4-204ENST00000442842 MAP3K15Q6ZN16 1313 aa17.3■□□□□ 0.36
TM9SF4-204ENST00000442842 CAMTA2O94983 1202 aa17.3■□□□□ 0.36
TM9SF4-204ENST00000442842 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
TM9SF4-204ENST00000442842 PDGFDQ9GZP0 370 aaPredicted RBP17.3■□□□□ 0.36
TM9SF4-204ENST00000442842 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
TM9SF4-204ENST00000442842 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
TM9SF4-204ENST00000442842 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
TM9SF4-204ENST00000442842 PTPRCP08575 1304 aa17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 MSL1Q68DK7 614 aa17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 ADCY9O60503 1353 aa17.28■□□□□ 0.36
TM9SF4-204ENST00000442842 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
TM9SF4-204ENST00000442842 F6X3S4 739 aa17.27■□□□□ 0.36
TM9SF4-204ENST00000442842 HLFQ16534 295 aa17.27■□□□□ 0.36
TM9SF4-204ENST00000442842 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
TM9SF4-204ENST00000442842 PLBD2Q8NHP8 589 aa17.27■□□□□ 0.36
TM9SF4-204ENST00000442842 CASZ1Q86V15 1759 aa17.27■□□□□ 0.35
TM9SF4-204ENST00000442842 ARFGEF2Q9Y6D5 1785 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 GYS1P13807 737 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 FKBP8Q14318 412 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 MYD88Q99836 296 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
TM9SF4-204ENST00000442842 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 PLIN1O60240 522 aa17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 ZBTB7AO95365 584 aa17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 KSR2Q6VAB6 950 aa17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
TM9SF4-204ENST00000442842 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
TM9SF4-204ENST00000442842 GPTP24298 496 aa17.24■□□□□ 0.35
TM9SF4-204ENST00000442842 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
TM9SF4-204ENST00000442842 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
TM9SF4-204ENST00000442842 ATP5J2-PTCD1G3V325 749 aa17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 TRIM27P14373 513 aa17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 ATF7IPQ6VMQ6 1270 aa17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 NIP7Q9Y221 180 aaKnown RBP eCLIP17.23■□□□□ 0.35
TM9SF4-204ENST00000442842 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 FAM177BA6PVY3 158 aa17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
TM9SF4-204ENST00000442842 TCIRG1Q13488 830 aa17.21■□□□□ 0.35
TM9SF4-204ENST00000442842 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
TM9SF4-204ENST00000442842 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 NFIXQ14938 502 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 SLC16A10Q8TF71 515 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 SETDB2Q96T68 719 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 MTFR1LQ9H019 292 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 ABCC4O15439 1325 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
TM9SF4-204ENST00000442842 RGL2O15211 777 aa17.19■□□□□ 0.34
TM9SF4-204ENST00000442842 NPHP1O15259 732 aa17.19■□□□□ 0.34
TM9SF4-204ENST00000442842 MMP10P09238 476 aa17.19■□□□□ 0.34
TM9SF4-204ENST00000442842 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
TM9SF4-204ENST00000442842 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
TM9SF4-204ENST00000442842 DDR1Q08345 913 aa17.18■□□□□ 0.34
TM9SF4-204ENST00000442842 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
TM9SF4-204ENST00000442842 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
TM9SF4-204ENST00000442842 ISCA1Q9BUE6 129 aa17.18■□□□□ 0.34
TM9SF4-204ENST00000442842 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 POLD1P28340 1107 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 NUP98P52948 1817 aa17.17■□□□□ 0.34
TM9SF4-204ENST00000442842 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 RLBP1P12271 317 aa17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms