RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 FKBP8Q14318 412 aa10.8□□□□□ -0.68
TIMP1-203ENST00000441738 PROSER3Q2NL68 480 aa10.8□□□□□ -0.68
TIMP1-203ENST00000441738 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
TIMP1-203ENST00000441738 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
TIMP1-203ENST00000441738 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
TIMP1-203ENST00000441738 WDR90Q96KV7 1748 aa10.8□□□□□ -0.68
TIMP1-203ENST00000441738 CARMIL3Q8ND23 1372 aa10.79□□□□□ -0.68
TIMP1-203ENST00000441738 CAMTA2O94983 1202 aa10.79□□□□□ -0.68
TIMP1-203ENST00000441738 IL6STP40189 918 aaPredicted RBP10.79□□□□□ -0.68
TIMP1-203ENST00000441738 USPL1Q5W0Q7 1092 aa10.79□□□□□ -0.68
TIMP1-203ENST00000441738 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
TIMP1-203ENST00000441738 NARFQ9UHQ1 456 aa10.79□□□□□ -0.68
TIMP1-203ENST00000441738 CD2APQ9Y5K6 639 aa10.79□□□□□ -0.68
TIMP1-203ENST00000441738 PXDNLA1KZ92 1463 aa10.79□□□□□ -0.68
TIMP1-203ENST00000441738 MSH5O43196 834 aa10.78□□□□□ -0.68
TIMP1-203ENST00000441738 STARD3NLO95772 234 aa10.78□□□□□ -0.68
TIMP1-203ENST00000441738 ANXA1P04083 346 aa10.78□□□□□ -0.68
TIMP1-203ENST00000441738 TM4SF1P30408 202 aa10.78□□□□□ -0.68
TIMP1-203ENST00000441738 C8orf58Q8NAV2 365 aa10.78□□□□□ -0.68
TIMP1-203ENST00000441738 TEX13AQ9BXU3 409 aaPredicted RBP10.78□□□□□ -0.68
TIMP1-203ENST00000441738 TAF1P21675 1872 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 MMP10P09238 476 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 FSTL1Q12841 308 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 C16orf71Q8IYS4 520 aaPredicted RBP10.77□□□□□ -0.69
TIMP1-203ENST00000441738 TSPYL6Q8N831 410 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 TBC1D2BQ9UPU7 963 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 SALL2Q9Y467 1007 aaPredicted RBP10.77□□□□□ -0.69
TIMP1-203ENST00000441738 LAS1LQ9Y4W2 734 aaKnown RBP10.77□□□□□ -0.69
TIMP1-203ENST00000441738 IL16Q14005 1332 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 FANCIQ9NVI1 1328 aa10.77□□□□□ -0.69
TIMP1-203ENST00000441738 COL4A1P02462 1669 aa10.76□□□□□ -0.69
TIMP1-203ENST00000441738 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
TIMP1-203ENST00000441738 RFC4P35249 363 aa10.76□□□□□ -0.69
TIMP1-203ENST00000441738 NFIXQ14938 502 aa10.76□□□□□ -0.69
TIMP1-203ENST00000441738 TTLL7Q6ZT98 887 aa10.76□□□□□ -0.69
TIMP1-203ENST00000441738 NMRK2Q9NPI5 230 aa10.76□□□□□ -0.69
TIMP1-203ENST00000441738 SBF1O95248 1867 aa10.75□□□□□ -0.69
TIMP1-203ENST00000441738 HMGB2P26583 209 aaKnown RBP10.75□□□□□ -0.69
TIMP1-203ENST00000441738 GNAI1P63096 354 aa10.75□□□□□ -0.69
TIMP1-203ENST00000441738 HLFQ16534 295 aa10.75□□□□□ -0.69
TIMP1-203ENST00000441738 TBC1D9BQ66K14 1250 aa10.75□□□□□ -0.69
TIMP1-203ENST00000441738 ERBB4Q15303 1308 aa10.75□□□□□ -0.69
TIMP1-203ENST00000441738 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 HOXB7P09629 217 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 DUSP27Q5VZP5 1158 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 DZIP3Q86Y13 1208 aaKnown RBP10.74□□□□□ -0.69
TIMP1-203ENST00000441738 NLGN1Q8N2Q7 840 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 CHPF2Q9P2E5 772 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 SLX4Q8IY92 1834 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 MYH3P11055 1940 aa10.74□□□□□ -0.69
TIMP1-203ENST00000441738 FER1L6Q2WGJ9 1857 aa10.73□□□□□ -0.69
TIMP1-203ENST00000441738 MYL6BP14649 208 aa10.73□□□□□ -0.69
TIMP1-203ENST00000441738 EIF2S2P20042 333 aaKnown RBP10.73□□□□□ -0.69
TIMP1-203ENST00000441738 WDR63Q8IWG1 891 aa10.73□□□□□ -0.69
TIMP1-203ENST00000441738 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
TIMP1-203ENST00000441738 UBN2Q6ZU65 1347 aa10.73□□□□□ -0.69
TIMP1-203ENST00000441738 ELL2O00472 640 aaPredicted RBP10.72□□□□□ -0.69
TIMP1-203ENST00000441738 MAP3K15Q6ZN16 1313 aa10.72□□□□□ -0.69
TIMP1-203ENST00000441738 ABCC12Q96J65 1359 aa10.72□□□□□ -0.69
TIMP1-203ENST00000441738 PCNTO95613 3336 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 A0A087WZG4 1122 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 ZPR1O75312 459 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 KCNA3P22001 575 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.69
TIMP1-203ENST00000441738 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 TRMT2AQ8IZ69 625 aaKnown RBP10.71□□□□□ -0.69
TIMP1-203ENST00000441738 CDCA7LQ96GN5 454 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 SPEF2Q9C093 1822 aa10.71□□□□□ -0.69
TIMP1-203ENST00000441738 DDX21Q9NR30 783 aaKnown RBP eCLIP10.71□□□□□ -0.69
TIMP1-203ENST00000441738 A0A1B0GUL6 1792 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 RGL2O15211 777 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
TIMP1-203ENST00000441738 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 XAGE3Q8WTP9 111 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
TIMP1-203ENST00000441738 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
TIMP1-203ENST00000441738 RIC1Q4ADV7 1423 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 DICER1Q9UPY3 1922 aaKnown RBP10.69□□□□□ -0.7
TIMP1-203ENST00000441738 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
TIMP1-203ENST00000441738 VAMP4O75379 141 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 SERPINB2P05120 415 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 SLFN5Q08AF3 891 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 COPS6Q7L5N1 327 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 G2E3Q7L622 706 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 CCDC24Q8N4L8 307 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 LTBP1Q14766 1721 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 TIAM2Q8IVF5 1701 aa10.69□□□□□ -0.7
TIMP1-203ENST00000441738 IBTKQ9P2D0 1353 aaPredicted RBP10.68□□□□□ -0.7
TIMP1-203ENST00000441738 MLLT1Q03111 559 aaPredicted RBP10.68□□□□□ -0.7
TIMP1-203ENST00000441738 TWISTNBQ3B726 338 aaPredicted RBP10.68□□□□□ -0.7
TIMP1-203ENST00000441738 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
TIMP1-203ENST00000441738 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
TIMP1-203ENST00000441738 ZNF34Q8IZ26 560 aa10.68□□□□□ -0.7
TIMP1-203ENST00000441738 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms