RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 USP42Q9H9J4 1324 aaKnown RBP8.76□□□□□ -1.01
SP140-206ENST00000441657 KTN1Q86UP2 1357 aaKnown RBP8.75□□□□□ -1.01
SP140-206ENST00000441657 COL6A3P12111 3177 aa8.75□□□□□ -1.01
SP140-206ENST00000441657 LOC105371045A0A1W2PR82 267 aa8.75□□□□□ -1.01
SP140-206ENST00000441657 TRAF5O00463 557 aa8.75□□□□□ -1.01
SP140-206ENST00000441657 TRPA1O75762 1119 aa8.75□□□□□ -1.01
SP140-206ENST00000441657 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
SP140-206ENST00000441657 ZNF541Q9H0D2 1346 aa8.75□□□□□ -1.01
SP140-206ENST00000441657 CENPJQ9HC77 1338 aaPredicted RBP8.75□□□□□ -1.01
SP140-206ENST00000441657 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
SP140-206ENST00000441657 MKI67P46013 3256 aaKnown RBP8.74□□□□□ -1.01
SP140-206ENST00000441657 CELF2O95319 508 aaKnown RBP8.74□□□□□ -1.01
SP140-206ENST00000441657 BICDL1Q6ZP65 573 aa8.74□□□□□ -1.01
SP140-206ENST00000441657 NME9Q86XW9 330 aa8.74□□□□□ -1.01
SP140-206ENST00000441657 ZNF622Q969S3 477 aaKnown RBP eCLIP8.74□□□□□ -1.01
SP140-206ENST00000441657 OTUD5Q96G74 571 aa8.74□□□□□ -1.01
SP140-206ENST00000441657 ATG3Q9NT62 314 aa8.74□□□□□ -1.01
SP140-206ENST00000441657 RNF186Q9NXI6 227 aa8.74□□□□□ -1.01
SP140-206ENST00000441657 KIAA0100Q14667 2235 aaKnown RBP8.74□□□□□ -1.01
SP140-206ENST00000441657 NKX1-1Q15270 411 aaPredicted RBP8.73□□□□□ -1.01
SP140-206ENST00000441657 SOGA3Q5TF21 947 aa8.73□□□□□ -1.01
SP140-206ENST00000441657 NBPF6Q5VWK0 638 aa8.73□□□□□ -1.01
SP140-206ENST00000441657 LHX8Q68G74 356 aa8.73□□□□□ -1.01
SP140-206ENST00000441657 NBPF4Q96M43 638 aa8.73□□□□□ -1.01
SP140-206ENST00000441657 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
SP140-206ENST00000441657 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
SP140-206ENST00000441657 MYH14Q7Z406 1995 aaKnown RBP8.72□□□□□ -1.01
SP140-206ENST00000441657 HOXC9P31274 260 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 FBXO46Q6PJ61 603 aaPredicted RBP8.72□□□□□ -1.01
SP140-206ENST00000441657 HS6ST3Q8IZP7 471 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 USHBP1Q8N6Y0 703 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 SLC4A9Q96Q91 983 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 HDAC9Q9UKV0 1011 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 AFDNP55196 1824 aaKnown RBP8.72□□□□□ -1.01
SP140-206ENST00000441657 KDRP35968 1356 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 AKAP11Q9UKA4 1901 aa8.72□□□□□ -1.01
SP140-206ENST00000441657 ZPR1O75312 459 aa8.71□□□□□ -1.02
SP140-206ENST00000441657 SERPINB2P05120 415 aa8.71□□□□□ -1.02
SP140-206ENST00000441657 LMOD1P29536 600 aaPredicted RBP8.71□□□□□ -1.02
SP140-206ENST00000441657 AMPHP49418 695 aa8.71□□□□□ -1.02
SP140-206ENST00000441657 NFIXQ14938 502 aa8.71□□□□□ -1.02
SP140-206ENST00000441657 GPC2Q8N158 579 aa8.71□□□□□ -1.02
SP140-206ENST00000441657 EVC2Q86UK5 1308 aa8.71□□□□□ -1.02
SP140-206ENST00000441657 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
SP140-206ENST00000441657 USP50Q70EL3 339 aaPredicted RBP8.7□□□□□ -1.02
SP140-206ENST00000441657 SYNE4Q8N205 404 aa8.7□□□□□ -1.02
SP140-206ENST00000441657 ZNF831Q5JPB2 1677 aa8.69□□□□□ -1.02
SP140-206ENST00000441657 NRXN2Q9P2S2 1712 aa8.69□□□□□ -1.02
SP140-206ENST00000441657 FZD9O00144 591 aa8.69□□□□□ -1.02
SP140-206ENST00000441657 KIF23Q02241 960 aaPredicted RBP8.69□□□□□ -1.02
SP140-206ENST00000441657 NBR1Q14596 966 aa8.69□□□□□ -1.02
SP140-206ENST00000441657 GSE1Q14687 1217 aa8.69□□□□□ -1.02
SP140-206ENST00000441657 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
SP140-206ENST00000441657 ZNF579Q8NAF0 562 aaKnown RBP8.69□□□□□ -1.02
SP140-206ENST00000441657 CNKSR1Q969H4 720 aa8.69□□□□□ -1.02
SP140-206ENST00000441657 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
SP140-206ENST00000441657 H0YGN5 161 aa8.68□□□□□ -1.02
SP140-206ENST00000441657 COL9A1P20849 921 aa8.68□□□□□ -1.02
SP140-206ENST00000441657 PDE6BP35913 854 aa8.68□□□□□ -1.02
SP140-206ENST00000441657 CRKLP46109 303 aaKnown RBP8.68□□□□□ -1.02
SP140-206ENST00000441657 HUNKP57058 714 aa8.68□□□□□ -1.02
SP140-206ENST00000441657 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
SP140-206ENST00000441657 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
SP140-206ENST00000441657 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
SP140-206ENST00000441657 FAM155AB1AL88 458 aaPredicted RBP8.67□□□□□ -1.02
SP140-206ENST00000441657 EPS15P42566 896 aa8.67□□□□□ -1.02
SP140-206ENST00000441657 RGMBQ6NW40 437 aa8.67□□□□□ -1.02
SP140-206ENST00000441657 CARMIL3Q8ND23 1372 aa8.67□□□□□ -1.02
SP140-206ENST00000441657 ZNF408Q9H9D4 720 aa8.67□□□□□ -1.02
SP140-206ENST00000441657 ZNF277Q9NRM2 450 aaPredicted RBP8.67□□□□□ -1.02
SP140-206ENST00000441657 SBNO2Q9Y2G9 1366 aa8.67□□□□□ -1.02
SP140-206ENST00000441657 MON2Q7Z3U7 1717 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 FKBP4Q02790 459 aaKnown RBP eCLIP8.66□□□□□ -1.02
SP140-206ENST00000441657 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
SP140-206ENST00000441657 ZNF296Q8WUU4 475 aaPredicted RBP8.66□□□□□ -1.02
SP140-206ENST00000441657 CSRNP1Q96S65 589 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 BRIP1Q9BX63 1249 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 GLIS2Q9BZE0 524 aaPredicted RBP8.66□□□□□ -1.02
SP140-206ENST00000441657 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 GJA3Q9Y6H8 435 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 SLX4Q8IY92 1834 aa8.66□□□□□ -1.02
SP140-206ENST00000441657 PLA2G5P39877 138 aa8.65□□□□□ -1.02
SP140-206ENST00000441657 SCNN1DP51172 638 aa8.65□□□□□ -1.02
SP140-206ENST00000441657 EIF6P56537 245 aaKnown RBP8.65□□□□□ -1.02
SP140-206ENST00000441657 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
SP140-206ENST00000441657 SCN11AQ9UI33 1791 aa8.65□□□□□ -1.02
SP140-206ENST00000441657 EN2P19622 333 aaPredicted RBP8.64□□□□□ -1.03
SP140-206ENST00000441657 IARSP41252 1262 aaKnown RBP8.64□□□□□ -1.03
SP140-206ENST00000441657 JDP2Q8WYK2 163 aa8.64□□□□□ -1.03
SP140-206ENST00000441657 FAM122AQ96E09 287 aa8.64□□□□□ -1.03
SP140-206ENST00000441657 NARFQ9UHQ1 456 aa8.64□□□□□ -1.03
SP140-206ENST00000441657 ZNF157P51786 506 aaPredicted RBP8.63□□□□□ -1.03
SP140-206ENST00000441657 CLCN6P51797 869 aa8.63□□□□□ -1.03
SP140-206ENST00000441657 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
SP140-206ENST00000441657 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
SP140-206ENST00000441657 C7orf43Q8WVR3 580 aa8.63□□□□□ -1.03
SP140-206ENST00000441657 STXBP5LQ9Y2K9 1186 aa8.63□□□□□ -1.03
SP140-206ENST00000441657 PAPPA2Q9BXP8 1791 aa8.63□□□□□ -1.03
SP140-206ENST00000441657 RTL1A6NKG5 1358 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms