RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 GTPBP4Q9BZE4 634 aaKnown RBP7.67□□□□□ -1.18
USP46-201ENST00000441222 A0A1W2PRG0 241 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 NLRP5P59047 1200 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 NFE2L2Q16236 605 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 CCDC96Q2M329 555 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 SPTY2D1Q68D10 685 aaPredicted RBP7.67□□□□□ -1.18
USP46-201ENST00000441222 UTP14AQ9BVJ6 771 aaKnown RBP7.67□□□□□ -1.18
USP46-201ENST00000441222 IQCGQ9H095 443 aaKnown RBP7.67□□□□□ -1.18
USP46-201ENST00000441222 BAG3O95817 575 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 LDHCP07864 332 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 HSPA4P34932 840 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
USP46-201ENST00000441222 ANKLE2Q86XL3 938 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP46-201ENST00000441222 ATP2A1O14983 1001 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 TUBB4AP04350 444 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 IVLP07476 585 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 UBA7P41226 1012 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 PDE4BQ07343 736 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 KIAA1524Q8TCG1 905 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 CCDC77Q9BR77 488 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 BCAR3O75815 825 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 TNNT1P13805 278 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 TICAM2Q86XR7 235 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 TTC14Q96N46 770 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 ZSCAN16Q9H4T2 348 aaPredicted RBP7.67□□□□□ -1.18
USP46-201ENST00000441222 ERBINQ96RT1 1412 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 NBPF7P0C2Y1 421 aaPredicted RBP7.66□□□□□ -1.18
USP46-201ENST00000441222 HYPKQ9NX55 129 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 NCOA2Q15596 1464 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 KIAA1107Q9UPP5 1409 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 ERMNQ8TAM6 284 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 JAKMIP2Q96AA8 810 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 CCDC40Q4G0X9 1142 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 MX1P20591 662 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 DNAAF4Q8WXU2 420 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 HMG20BQ9P0W2 317 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 BRPF3Q9ULD4 1205 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 CCDC171Q6TFL3 1326 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 CYLC1P35663 651 aaPredicted RBP7.66□□□□□ -1.18
USP46-201ENST00000441222 CCDC14Q49A88 953 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 PTPRCP08575 1304 aa7.66□□□□□ -1.18
USP46-201ENST00000441222 IFIT3O14879 490 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 CEP135Q66GS9 1140 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 B4DLN1 442 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 PRC1O43663 620 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 RANBP6O60518 1105 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 TUBBP07437 444 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 MRPL12P52815 198 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 RPGRQ92834 1020 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 TSR2Q969E8 191 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 FGD5Q6ZNL6 1462 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 PRPF4BQ13523 1007 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 PRIMPOLQ96LW4 560 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 HLA-DOAP06340 250 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 SNW1Q13573 536 aaKnown RBP7.65□□□□□ -1.18
USP46-201ENST00000441222 TMTC2Q8N394 836 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 ANAPC4Q9UJX5 808 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 ATAD2BQ9ULI0 1458 aa7.65□□□□□ -1.18
USP46-201ENST00000441222 MAP7D1Q3KQU3 841 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 MAATS1Q7Z4T9 603 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 TEX13AQ9BXU3 409 aaPredicted RBP7.65□□□□□ -1.19
USP46-201ENST00000441222 TMOD3Q9NYL9 352 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 C9orf84Q5VXU9 1444 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 MRPS9P82933 396 aaKnown RBP7.65□□□□□ -1.19
USP46-201ENST00000441222 CAMK4Q16566 473 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 CFAP70Q5T0N1 1121 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 TCERG1LQ5VWI1 586 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 CEP128Q6ZU80 1094 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 EVI5LQ96CN4 794 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 CDCA7LQ96GN5 454 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 CDC5LQ99459 802 aaKnown RBP7.65□□□□□ -1.19
USP46-201ENST00000441222 ARFGAP3Q9NP61 516 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 JADE2Q9NQC1 790 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 MKRN1Q9UHC7 482 aaKnown RBP7.65□□□□□ -1.19
USP46-201ENST00000441222 EPRSP07814 1512 aaKnown RBP7.65□□□□□ -1.19
USP46-201ENST00000441222 DYNC1I1O14576 645 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 CCDC6Q16204 474 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 LRSAM1Q6UWE0 723 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 CCDC110Q8TBZ0 833 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 LMBR1Q8WVP7 490 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 SMC6Q96SB8 1091 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 SYNCQ9H7C4 482 aa7.65□□□□□ -1.19
USP46-201ENST00000441222 OPA1O60313 960 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 UBE2HP62256 183 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 TIGD1Q96MW7 591 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 NKTRP30414 1462 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 TAF7Q15545 349 aaPredicted RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 CCDC102BQ68D86 513 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 FSIP1Q8NA03 581 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 GOLGA8BA8MQT2 603 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 NOL3O60936 208 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 SPAG1Q07617 926 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 NCBP1Q09161 790 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 CABP5Q9NP86 173 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 EXOC1Q9NV70 894 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 CCDC61Q9Y6R9 512 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms