RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 KDM5CP41229 1560 aa15.03■□□□□ -0
BRPF3-203ENST00000441123 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
BRPF3-203ENST00000441123 SLC5A1P13866 664 aa15.03■□□□□ -0
BRPF3-203ENST00000441123 CEP170Q5SW79 1584 aa15.03■□□□□ -0
BRPF3-203ENST00000441123 PI4KAP2A4QPH2 592 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 FILIP1Q7Z7B0 1213 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 PI4KAP1Q8N8J0 262 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 NEK1Q96PY6 1258 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 EDC4Q6P2E9 1401 aaKnown RBP15.02■□□□□ -0
BRPF3-203ENST00000441123 CFAP74Q9C0B2 1584 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 A0A087WZG4 1122 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 TTLL5Q6EMB2 1281 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 CWC25Q9NXE8 425 aaPredicted RBP15.02■□□□□ -0
BRPF3-203ENST00000441123 CLIP2Q9UDT6 1046 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 KIF24Q5T7B8 1368 aa15.02■□□□□ -0
BRPF3-203ENST00000441123 ANKRD18BA2A2Z9 1011 aa15.02□□□□□ -0.01
BRPF3-203ENST00000441123 SNRPA1P09661 255 aaKnown RBP15.02□□□□□ -0.01
BRPF3-203ENST00000441123 BMP2KQ9NSY1 1161 aaPredicted RBP15.02□□□□□ -0.01
BRPF3-203ENST00000441123 XPCQ01831 940 aaPredicted RBP15.02□□□□□ -0.01
BRPF3-203ENST00000441123 CFAP100Q494V2 611 aa15.02□□□□□ -0.01
BRPF3-203ENST00000441123 CEP85Q6P2H3 762 aa15.02□□□□□ -0.01
BRPF3-203ENST00000441123 NAPBQ9H115 298 aa15.02□□□□□ -0.01
BRPF3-203ENST00000441123 IKQ13123 557 aaPredicted RBP15.01□□□□□ -0.01
BRPF3-203ENST00000441123 KIF18AQ8NI77 898 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 PYM1Q9BRP8 204 aaKnown RBP15.01□□□□□ -0.01
BRPF3-203ENST00000441123 GBP3Q9H0R5 595 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 RLBP1P12271 317 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 INTS4Q96HW7 963 aaKnown RBP15.01□□□□□ -0.01
BRPF3-203ENST00000441123 MYO5CQ9NQX4 1742 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 SYNMO15061 1565 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 HS1BP3Q53T59 392 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 DEF6Q9H4E7 631 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 EPB41L2O43491 1005 aaKnown RBP15.01□□□□□ -0.01
BRPF3-203ENST00000441123 ERLIN2O94905 339 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 SSRP1Q08945 709 aaKnown RBP15.01□□□□□ -0.01
BRPF3-203ENST00000441123 CAVIN4Q5BKX8 364 aa15.01□□□□□ -0.01
BRPF3-203ENST00000441123 MAP3K5Q99683 1374 aa15□□□□□ -0.01
BRPF3-203ENST00000441123 PRIMPOLQ96LW4 560 aa15□□□□□ -0.01
BRPF3-203ENST00000441123 CGNQ9P2M7 1197 aaKnown RBP15□□□□□ -0.01
BRPF3-203ENST00000441123 ZFYP08048 801 aaPredicted RBP15□□□□□ -0.01
BRPF3-203ENST00000441123 ANKRD24Q8TF21 1146 aa15□□□□□ -0.01
BRPF3-203ENST00000441123 SLC12A7Q9Y666 1083 aa15□□□□□ -0.01
BRPF3-203ENST00000441123 CLCN1P35523 988 aa15□□□□□ -0.01
BRPF3-203ENST00000441123 RBM25P49756 843 aaKnown RBP15□□□□□ -0.01
BRPF3-203ENST00000441123 RAD50Q92878 1312 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 HSP90AB2PQ58FF8 381 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 KRT28Q7Z3Y7 464 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 ODF2Q5BJF6 829 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 CCDC181Q5TID7 509 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 USP25Q9UHP3 1055 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 ADCY5O95622 1261 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 KSR2Q6VAB6 950 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 UBXN4Q92575 508 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 AOX1Q06278 1338 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 GOLGA8BA8MQT2 603 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 ZNF397Q8NF99 534 aaPredicted RBP14.99□□□□□ -0.01
BRPF3-203ENST00000441123 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 SBNO2Q9Y2G9 1366 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
BRPF3-203ENST00000441123 GOLGA6L9A6NEM1 432 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 SYCP1Q15431 976 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 FSIP1Q8NA03 581 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 KANK3Q6NY19 840 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 TAF3Q5VWG9 929 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 PLEKHM2Q8IWE5 1019 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 PTPRTO14522 1441 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 GOLGA8AA7E2F4 631 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 MCM3P25205 808 aa14.98□□□□□ -0.01
BRPF3-203ENST00000441123 TOP1P11387 765 aaKnown RBP14.97□□□□□ -0.01
BRPF3-203ENST00000441123 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
BRPF3-203ENST00000441123 UQCRFS1P1P0C7P4 283 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 ARHGAP29Q52LW3 1261 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 CCDC150Q8NCX0 1101 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 ABCA8O94911 1581 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 GOLGA6L10A6NI86 522 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 MPNDQ8N594 471 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 PDCL3Q9H2J4 239 aa14.97□□□□□ -0.01
BRPF3-203ENST00000441123 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
BRPF3-203ENST00000441123 IQCA1Q86XH1 822 aa14.96□□□□□ -0.01
BRPF3-203ENST00000441123 ANKRD13DQ6ZTN6 518 aa14.96□□□□□ -0.01
BRPF3-203ENST00000441123 XRCC6P12956 609 aaKnown RBP eCLIP14.96□□□□□ -0.01
BRPF3-203ENST00000441123 MTHFSDQ2M296 383 aaKnown RBP14.96□□□□□ -0.01
BRPF3-203ENST00000441123 GRM8O00222 908 aa14.96□□□□□ -0.02
BRPF3-203ENST00000441123 TMCO3Q6UWJ1 677 aa14.96□□□□□ -0.02
BRPF3-203ENST00000441123 GOLIM4O00461 696 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 F13A1P00488 732 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 PAXBP1Q9Y5B6 917 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 FOXO3O43524 673 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 FGFR1OPO95684 399 aaKnown RBP14.95□□□□□ -0.02
BRPF3-203ENST00000441123 CASQ1P31415 396 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 CNNM3Q8NE01 707 aa14.95□□□□□ -0.02
BRPF3-203ENST00000441123 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms