RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 MASTLQ96GX5 879 aa7.98□□□□□ -1.13
PTPRR-204ENST00000440835 IBTKQ9P2D0 1353 aaPredicted RBP7.98□□□□□ -1.13
PTPRR-204ENST00000440835 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-204ENST00000440835 IL17REQ8NFR9 667 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 PNISRQ8TF01 805 aaKnown RBP7.97□□□□□ -1.13
PTPRR-204ENST00000440835 IQCA1LA6NCM1 817 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 CANXP27824 592 aaKnown RBP7.97□□□□□ -1.13
PTPRR-204ENST00000440835 CNBD1Q8NA66 436 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 ZNF496Q96IT1 587 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-204ENST00000440835 WWC3Q9ULE0 1092 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 NFKBIEO00221 500 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 CAMTA2O94983 1202 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
PTPRR-204ENST00000440835 PRR5LQ6MZQ0 368 aa7.97□□□□□ -1.13
PTPRR-204ENST00000440835 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
PTPRR-204ENST00000440835 BTBD11A6QL63 1104 aa7.96□□□□□ -1.13
PTPRR-204ENST00000440835 NPR1P16066 1061 aa7.96□□□□□ -1.13
PTPRR-204ENST00000440835 TBC1D9BQ66K14 1250 aa7.96□□□□□ -1.13
PTPRR-204ENST00000440835 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.13
PTPRR-204ENST00000440835 RTF1Q92541 710 aaKnown RBP7.96□□□□□ -1.13
PTPRR-204ENST00000440835 L3MBTL3Q96JM7 780 aaPredicted RBP7.96□□□□□ -1.13
PTPRR-204ENST00000440835 RSPH6AQ9H0K4 717 aa7.96□□□□□ -1.13
PTPRR-204ENST00000440835 TAOK3Q9H2K8 898 aa7.96□□□□□ -1.13
PTPRR-204ENST00000440835 RTKN2Q8IZC4 609 aa7.96□□□□□ -1.14
PTPRR-204ENST00000440835 KDM3BQ7LBC6 1761 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 U2SURPO15042 1029 aaKnown RBP7.95□□□□□ -1.14
PTPRR-204ENST00000440835 SRGNP10124 158 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 RASSF7Q02833 373 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 CC2D1BQ5T0F9 858 aaKnown RBP7.95□□□□□ -1.14
PTPRR-204ENST00000440835 ALDH1B1P30837 517 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 CCDC93Q567U6 631 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 CHADLQ6NUI6 762 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 TPTE2Q6XPS3 522 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 DZIP3Q86Y13 1208 aaKnown RBP7.95□□□□□ -1.14
PTPRR-204ENST00000440835 ZNF622Q969S3 477 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRR-204ENST00000440835 NYXQ9GZU5 481 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 CREBZFQ9NS37 354 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 ERBB4Q15303 1308 aa7.95□□□□□ -1.14
PTPRR-204ENST00000440835 ERVV-1B6SEH8 477 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 NEFMP07197 916 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 ERFEQ4G0M1 354 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 VPS33BQ9H267 617 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 SLX4Q8IY92 1834 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 CACNA1SQ13698 1873 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 LDHDQ86WU2 507 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 FBXO3Q9UK99 471 aa7.94□□□□□ -1.14
PTPRR-204ENST00000440835 NPHP1O15259 732 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 PRKAR2BP31323 418 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 FKBP4Q02790 459 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTPRR-204ENST00000440835 BABAM1Q9NWV8 329 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 RNF123Q5XPI4 1314 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 TAF7Q15545 349 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-204ENST00000440835 PRPF40BQ6NWY9 871 aaKnown RBP7.93□□□□□ -1.14
PTPRR-204ENST00000440835 NBPF5PQ86XG9 351 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-204ENST00000440835 C7orf43Q8WVR3 580 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 SALL2Q9Y467 1007 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-204ENST00000440835 ADAMTSL1Q8N6G6 1762 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 POTECB2RU33 542 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 PRELPP51888 382 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 PNMA8AQ86V59 439 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-204ENST00000440835 PSMD1Q99460 953 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 TBC1D2BQ9UPU7 963 aa7.93□□□□□ -1.14
PTPRR-204ENST00000440835 C21orf2O43822 256 aa7.92□□□□□ -1.14
PTPRR-204ENST00000440835 A1BGP04217 495 aa7.92□□□□□ -1.14
PTPRR-204ENST00000440835 BICDL1Q6ZP65 573 aa7.92□□□□□ -1.14
PTPRR-204ENST00000440835 NUP98P52948 1817 aa7.92□□□□□ -1.14
PTPRR-204ENST00000440835 DLG5Q8TDM6 1919 aa7.92□□□□□ -1.14
PTPRR-204ENST00000440835 PPP2R1AP30153 589 aa7.91□□□□□ -1.14
PTPRR-204ENST00000440835 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
PTPRR-204ENST00000440835 PASKQ96RG2 1323 aa7.91□□□□□ -1.14
PTPRR-204ENST00000440835 HOXA10P31260 410 aaPredicted RBP7.91□□□□□ -1.14
PTPRR-204ENST00000440835 CRY2Q49AN0 593 aa7.91□□□□□ -1.14
PTPRR-204ENST00000440835 PHACTR3Q96KR7 559 aa7.91□□□□□ -1.14
PTPRR-204ENST00000440835 CNTNAP1P78357 1384 aa7.91□□□□□ -1.14
PTPRR-204ENST00000440835 U2AF1L5P0DN76 240 aaPredicted RBP7.9□□□□□ -1.14
PTPRR-204ENST00000440835 DEKP35659 375 aaKnown RBP7.9□□□□□ -1.14
PTPRR-204ENST00000440835 U2AF1Q01081 240 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTPRR-204ENST00000440835 TNS4Q8IZW8 715 aa7.9□□□□□ -1.14
PTPRR-204ENST00000440835 HACL1Q9UJ83 578 aa7.9□□□□□ -1.14
PTPRR-204ENST00000440835 THSD7BQ9C0I4 1608 aa7.9□□□□□ -1.14
PTPRR-204ENST00000440835 UTRNP46939 3433 aa7.9□□□□□ -1.14
PTPRR-204ENST00000440835 GPC2Q8N158 579 aa7.9□□□□□ -1.15
PTPRR-204ENST00000440835 CRAMP1Q96RY5 1269 aa7.9□□□□□ -1.15
PTPRR-204ENST00000440835 NIP7Q9Y221 180 aaKnown RBP eCLIP7.9□□□□□ -1.15
PTPRR-204ENST00000440835 USP16Q9Y5T5 823 aa7.9□□□□□ -1.15
PTPRR-204ENST00000440835 SNED1Q8TER0 1413 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 FZD9O00144 591 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 HSPA1AP0DMV8 641 aaKnown RBP7.89□□□□□ -1.15
PTPRR-204ENST00000440835 HSPA1BP0DMV9 641 aaKnown RBP7.89□□□□□ -1.15
PTPRR-204ENST00000440835 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
PTPRR-204ENST00000440835 PARP10Q53GL7 1025 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 KIF6Q6ZMV9 814 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 TAF1DQ9H5J8 278 aaPredicted RBP7.89□□□□□ -1.15
PTPRR-204ENST00000440835 MAP3K15Q6ZN16 1313 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 ANKRD36CQ5JPF3 1778 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 IARSP41252 1262 aaKnown RBP7.89□□□□□ -1.15
PTPRR-204ENST00000440835 TPRNQ4KMQ1 711 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 CDHR2Q9BYE9 1310 aa7.89□□□□□ -1.15
PTPRR-204ENST00000440835 TMEM88BA6NKF7 163 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 SUPT20HQ8NEM7 779 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms