RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
CHD6-204ENST00000440647 DHX29Q7Z478 1369 aaKnown RBP9.27□□□□□ -0.93
CHD6-204ENST00000440647 FAM135AQ9P2D6 1515 aa9.27□□□□□ -0.93
CHD6-204ENST00000440647 RNF144AP50876 292 aaPredicted RBP9.27□□□□□ -0.93
CHD6-204ENST00000440647 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
CHD6-204ENST00000440647 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
CHD6-204ENST00000440647 ARHGEF5Q12774 1597 aa9.27□□□□□ -0.93
CHD6-204ENST00000440647 POM121CA8CG34 1229 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 MEN1O00255 615 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 KIF3BO15066 747 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 GNRH1P01148 92 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 GPC1P35052 558 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
CHD6-204ENST00000440647 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 A2ML1A8K2U0 1454 aa9.26□□□□□ -0.93
CHD6-204ENST00000440647 VPS8Q8N3P4 1428 aa9.25□□□□□ -0.93
CHD6-204ENST00000440647 DNMT1P26358 1616 aaKnown RBP9.25□□□□□ -0.93
CHD6-204ENST00000440647 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
CHD6-204ENST00000440647 CLN3Q13286 438 aa9.25□□□□□ -0.93
CHD6-204ENST00000440647 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
CHD6-204ENST00000440647 LYSMD3Q7Z3D4 306 aa9.25□□□□□ -0.93
CHD6-204ENST00000440647 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
CHD6-204ENST00000440647 NLRP3Q96P20 1036 aa9.25□□□□□ -0.93
CHD6-204ENST00000440647 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 ZC3H13Q5T200 1668 aaKnown RBP9.24□□□□□ -0.93
CHD6-204ENST00000440647 TCOF1Q13428 1488 aaKnown RBP9.24□□□□□ -0.93
CHD6-204ENST00000440647 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 A6NJR5 290 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 TSPY4P0CV99 314 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 TSPY10P0CW01 314 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 WASHC2CQ9Y4E1 1318 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 SPATA31D1Q6ZQQ2 1576 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 TNRQ92752 1358 aa9.24□□□□□ -0.93
CHD6-204ENST00000440647 PZPP20742 1482 aa9.23□□□□□ -0.93
CHD6-204ENST00000440647 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
CHD6-204ENST00000440647 ITGA6P23229 1130 aa9.23□□□□□ -0.93
CHD6-204ENST00000440647 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
CHD6-204ENST00000440647 CNTNAP3BQ96NU0 1288 aa9.23□□□□□ -0.93
CHD6-204ENST00000440647 COL25A1Q9BXS0 654 aaPredicted RBP9.23□□□□□ -0.93
CHD6-204ENST00000440647 CNTNAP3Q9BZ76 1288 aa9.23□□□□□ -0.93
CHD6-204ENST00000440647 ZNF335Q9H4Z2 1342 aaPredicted RBP9.23□□□□□ -0.93
CHD6-204ENST00000440647 EIF2AK4Q9P2K8 1649 aaKnown RBP9.23□□□□□ -0.93
CHD6-204ENST00000440647 MAST1Q9Y2H9 1570 aa9.22□□□□□ -0.93
CHD6-204ENST00000440647 SKIP12755 728 aa9.22□□□□□ -0.93
CHD6-204ENST00000440647 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
CHD6-204ENST00000440647 GPR161Q8N6U8 529 aaKnown RBP9.22□□□□□ -0.93
CHD6-204ENST00000440647 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
CHD6-204ENST00000440647 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
CHD6-204ENST00000440647 RNF17Q9BXT8 1623 aaKnown RBP9.22□□□□□ -0.93
CHD6-204ENST00000440647 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
CHD6-204ENST00000440647 CNKSR1Q969H4 720 aa9.21□□□□□ -0.94
CHD6-204ENST00000440647 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
CHD6-204ENST00000440647 GRIP2Q9C0E4 1043 aa9.21□□□□□ -0.94
CHD6-204ENST00000440647 RAB6BQ9NRW1 208 aa9.21□□□□□ -0.94
CHD6-204ENST00000440647 MAP3K1Q13233 1512 aa9.21□□□□□ -0.94
CHD6-204ENST00000440647 UGGT1Q9NYU2 1555 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 CEP152O94986 1710 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 CDC14CA4D256 554 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 UBAP1LF5GYI3 381 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 RNF225M0QZC1 329 aaPredicted RBP9.2□□□□□ -0.94
CHD6-204ENST00000440647 IL2RAP01589 272 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 KCNMA1Q12791 1236 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 ESCO1Q5FWF5 840 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 VWA5B2Q8N398 1253 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 NLRP1Q9C000 1473 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 NEURL4Q96JN8 1562 aa9.2□□□□□ -0.94
CHD6-204ENST00000440647 CENPCQ03188 943 aa9.19□□□□□ -0.94
CHD6-204ENST00000440647 HRH3Q9Y5N1 445 aa9.19□□□□□ -0.94
CHD6-204ENST00000440647 MIA2Q96PC5 1412 aa9.19□□□□□ -0.94
CHD6-204ENST00000440647 ABCC3O15438 1527 aa9.19□□□□□ -0.94
CHD6-204ENST00000440647 CPS1P31327 1500 aa9.19□□□□□ -0.94
CHD6-204ENST00000440647 CROCC2H7BZ55 1655 aa9.19□□□□□ -0.94
CHD6-204ENST00000440647 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
CHD6-204ENST00000440647 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
CHD6-204ENST00000440647 DEPDC5O75140 1603 aa9.18□□□□□ -0.94
CHD6-204ENST00000440647 EML3Q32P44 896 aa9.18□□□□□ -0.94
CHD6-204ENST00000440647 THEMISQ8N1K5 641 aaPredicted RBP9.18□□□□□ -0.94
CHD6-204ENST00000440647 DUOX2Q9NRD8 1548 aa9.18□□□□□ -0.94
CHD6-204ENST00000440647 IQGAP1P46940 1657 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHD6-204ENST00000440647 SPATA31C2B4DYI2 1134 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 RHOQP17081 205 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 KRT76Q01546 638 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 POU4F2Q12837 409 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 ANKLE2Q86XL3 938 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 ETNK1Q9HBU6 452 aa9.17□□□□□ -0.94
CHD6-204ENST00000440647 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
CHD6-204ENST00000440647 PTPN23Q9H3S7 1636 aa9.16□□□□□ -0.94
CHD6-204ENST00000440647 SHANK2Q9UPX8 1470 aa9.16□□□□□ -0.94
CHD6-204ENST00000440647 NCOA4Q13772 614 aa9.16□□□□□ -0.94
CHD6-204ENST00000440647 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
CHD6-204ENST00000440647 FOXR1Q6PIV2 292 aa9.16□□□□□ -0.94
CHD6-204ENST00000440647 ADAMTS8Q9UP79 889 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms