RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 ARFGEF2Q9Y6D5 1785 aa17.56■□□□□ 0.4
SP4-203ENST00000440636 CACNA1SQ13698 1873 aa17.55■□□□□ 0.4
SP4-203ENST00000440636 ST5P78524 1137 aa17.55■□□□□ 0.4
SP4-203ENST00000440636 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
SP4-203ENST00000440636 PRPF40BQ6NWY9 871 aaKnown RBP17.55■□□□□ 0.4
SP4-203ENST00000440636 NPM2Q86SE8 214 aaKnown RBP17.55■□□□□ 0.4
SP4-203ENST00000440636 DZIP3Q86Y13 1208 aaKnown RBP17.55■□□□□ 0.4
SP4-203ENST00000440636 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
SP4-203ENST00000440636 NPHP1O15259 732 aa17.54■□□□□ 0.4
SP4-203ENST00000440636 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
SP4-203ENST00000440636 MASTLQ96GX5 879 aa17.54■□□□□ 0.4
SP4-203ENST00000440636 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
SP4-203ENST00000440636 PRAMEF22A3QJZ6 481 aa17.53■□□□□ 0.4
SP4-203ENST00000440636 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
SP4-203ENST00000440636 POTEIP0CG38 1075 aa17.53■□□□□ 0.4
SP4-203ENST00000440636 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
SP4-203ENST00000440636 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
SP4-203ENST00000440636 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
SP4-203ENST00000440636 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
SP4-203ENST00000440636 CAPN15O75808 1086 aa17.52■□□□□ 0.4
SP4-203ENST00000440636 CLEC4GQ6UXB4 293 aa17.52■□□□□ 0.4
SP4-203ENST00000440636 C7orf43Q8WVR3 580 aa17.52■□□□□ 0.4
SP4-203ENST00000440636 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
SP4-203ENST00000440636 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
SP4-203ENST00000440636 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
SP4-203ENST00000440636 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
SP4-203ENST00000440636 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
SP4-203ENST00000440636 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
SP4-203ENST00000440636 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 NPR1P16066 1061 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
SP4-203ENST00000440636 MCM10Q7L590 875 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 MKRN1Q9UHC7 482 aaKnown RBP17.48■□□□□ 0.39
SP4-203ENST00000440636 SCN4AP35499 1836 aa17.48■□□□□ 0.39
SP4-203ENST00000440636 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
SP4-203ENST00000440636 IQCA1LA6NCM1 817 aa17.47■□□□□ 0.39
SP4-203ENST00000440636 RGL2O15211 777 aa17.47■□□□□ 0.39
SP4-203ENST00000440636 LDHDQ86WU2 507 aa17.47■□□□□ 0.39
SP4-203ENST00000440636 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
SP4-203ENST00000440636 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.39
SP4-203ENST00000440636 TPTE2Q6XPS3 522 aa17.46■□□□□ 0.39
SP4-203ENST00000440636 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
SP4-203ENST00000440636 NIP7Q9Y221 180 aaKnown RBP eCLIP17.46■□□□□ 0.39
SP4-203ENST00000440636 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
SP4-203ENST00000440636 CNTNAP1P78357 1384 aa17.45■□□□□ 0.38
SP4-203ENST00000440636 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
SP4-203ENST00000440636 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
SP4-203ENST00000440636 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
SP4-203ENST00000440636 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
SP4-203ENST00000440636 ZNF277Q9NRM2 450 aaPredicted RBP17.45■□□□□ 0.38
SP4-203ENST00000440636 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
SP4-203ENST00000440636 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
SP4-203ENST00000440636 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
SP4-203ENST00000440636 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
SP4-203ENST00000440636 HLFQ16534 295 aa17.43■□□□□ 0.38
SP4-203ENST00000440636 RTKN2Q8IZC4 609 aa17.43■□□□□ 0.38
SP4-203ENST00000440636 SNED1Q8TER0 1413 aa17.42■□□□□ 0.38
SP4-203ENST00000440636 FAM177BA6PVY3 158 aa17.42■□□□□ 0.38
SP4-203ENST00000440636 ADAMTSL1Q8N6G6 1762 aa17.42■□□□□ 0.38
SP4-203ENST00000440636 FZD9O00144 591 aa17.41■□□□□ 0.38
SP4-203ENST00000440636 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
SP4-203ENST00000440636 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
SP4-203ENST00000440636 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 TMEM88BA6NKF7 163 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 FOXN1O15353 648 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 EPHX2P34913 555 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 IARSP41252 1262 aaKnown RBP17.4■□□□□ 0.38
SP4-203ENST00000440636 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
SP4-203ENST00000440636 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
SP4-203ENST00000440636 CRY2Q49AN0 593 aa17.39■□□□□ 0.37
SP4-203ENST00000440636 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
SP4-203ENST00000440636 ABCC12Q96J65 1359 aa17.39■□□□□ 0.37
SP4-203ENST00000440636 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
SP4-203ENST00000440636 VEGFBP49765 207 aa17.38■□□□□ 0.37
SP4-203ENST00000440636 PSMD1Q99460 953 aa17.38■□□□□ 0.37
SP4-203ENST00000440636 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
SP4-203ENST00000440636 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 GPC2Q8N158 579 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 NUP98P52948 1817 aa17.37■□□□□ 0.37
SP4-203ENST00000440636 COL4A5P29400 1685 aa17.36■□□□□ 0.37
SP4-203ENST00000440636 MAP3K15Q6ZN16 1313 aa17.36■□□□□ 0.37
SP4-203ENST00000440636 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
SP4-203ENST00000440636 MAP1SQ66K74 1059 aaPredicted RBP17.35■□□□□ 0.37
SP4-203ENST00000440636 CC2D2BQ6DHV5 1058 aa17.35■□□□□ 0.37
SP4-203ENST00000440636 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
SP4-203ENST00000440636 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
SP4-203ENST00000440636 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
SP4-203ENST00000440636 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
SP4-203ENST00000440636 RASSF10A6NK89 507 aa17.34■□□□□ 0.37
SP4-203ENST00000440636 HOXA10P31260 410 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms