RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GALNT6Q8NCL4 622 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 EDARADDQ8WWZ3 215 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 RRAGCQ9HB90 399 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 KIAA1024Q9UPX6 916 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 PARP3Q9Y6F1 533 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L15C9J2P7 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L10C9JJH3 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L12C9JPN9 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L11C9JVI0 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L21D6R901 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L18D6R9N7 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L22D6RA61 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L19D6RCP7 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L20D6RJB6 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZBTB7BO15156 539 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 LMOD1P29536 600 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 TXLNAP40222 546 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP17L24Q0WX57 530 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZNF468Q5VIY5 522 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZDHHC1Q8WTX9 485 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 VTI1AQ96AJ9 217 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 HINFPQ9BQA5 517 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 NOP53Q9NZM5 478 aaKnown RBP6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 GGA1Q9UJY5 639 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 USP3Q9Y6I4 520 aa6.15□□□□□ -1.42
HMGB3P11-201ENST00000440127 CD33P20138 364 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 ALAS2P22557 587 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 POTEAQ6S8J7 498 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 LRRC69Q6ZNQ3 347 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 ANKMY2Q8IV38 441 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 TSEN2Q8NCE0 465 aaKnown RBP6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 PHACTR1Q9C0D0 580 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 EFCC1Q9HA90 598 aa6.14□□□□□ -1.43
HMGB3P11-201ENST00000440127 SFI1A8K8P3 1242 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 GNB5O14775 395 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 EFSO43281 561 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 EPXP11678 715 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 EPB42P16452 691 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 IGFBP4P22692 258 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 CTBSQ01459 385 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 PTK7Q13308 1070 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 TBCELQ5QJ74 424 aa6.13□□□□□ -1.43
HMGB3P11-201ENST00000440127 SPDYE3A6NKU9 549 aa6.12□□□□□ -1.43
HMGB3P11-201ENST00000440127 NEURL1BA8MQ27 555 aa6.12□□□□□ -1.43
HMGB3P11-201ENST00000440127 DPYDQ12882 1025 aa6.12□□□□□ -1.43
HMGB3P11-201ENST00000440127 ATAD2Q6PL18 1390 aa6.12□□□□□ -1.43
HMGB3P11-201ENST00000440127 SCG3Q8WXD2 468 aaKnown RBP6.12□□□□□ -1.43
HMGB3P11-201ENST00000440127 ARXQ96QS3 562 aa6.12□□□□□ -1.43
HMGB3P11-201ENST00000440127 FOXO3O43524 673 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 RFX1P22670 979 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 RTN1Q16799 776 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 IER5Q5VY09 327 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 FAM200AQ8TCP9 573 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 CHMP7Q8WUX9 453 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 CEP63Q96MT8 703 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 BRD7Q9NPI1 651 aa6.11□□□□□ -1.43
HMGB3P11-201ENST00000440127 SHISA8B8ZZ34 492 aa6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 C2CD2LO14523 706 aa6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 SIN3BO75182 1162 aa6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 CRTC2Q53ET0 693 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 KANK4Q5T7N3 995 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 ALDH16A1Q8IZ83 802 aa6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 CCDC97Q96F63 343 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 ZNF777Q9ULD5 760 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 KCNH4Q9UQ05 1017 aa6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 HCN4Q9Y3Q4 1203 aa6.1□□□□□ -1.43
HMGB3P11-201ENST00000440127 CNTNAP5Q8WYK1 1306 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 ELOA3DA6NLF2 546 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 KCNQ4P56696 695 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 SWI5Q1ZZU3 235 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 ELOA3BQ3SY89 546 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 CHSY3Q70JA7 882 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 ELOA3Q8NG57 546 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 BTBD6Q96KE9 485 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 SUSD3Q96L08 255 aa6.09□□□□□ -1.43
HMGB3P11-201ENST00000440127 TGFBR3LH3BV60 316 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 DKK1O94907 266 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 ARID4AP29374 1257 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 TYRO3Q06418 890 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 SPEM2Q0P670 501 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 SYT9Q86SS6 491 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 DCAF5Q96JK2 942 aa6.08□□□□□ -1.44
HMGB3P11-201ENST00000440127 ADARB2-AS1A8MUL3 147 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 MSTNO14793 375 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 C21orf2O43822 256 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 DGKGP49619 791 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 PCBP4P57723 403 aaKnown RBP6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 PCSK7Q16549 785 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 CFAP70Q5T0N1 1121 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 SH3PXD2AQ5TCZ1 1133 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 BTLAQ7Z6A9 289 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 C14orf37Q86TY3 774 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 HSH2DQ96JZ2 352 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms