RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 A0A087WZG4 1122 aa18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 POLD1P28340 1107 aa18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 CHPF2Q9P2E5 772 aa18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 PPP1R1BQ9UD71 204 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-204ENST00000440083 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
TNFRSF1A-204ENST00000440083 MMP10P09238 476 aa18.56■□□□□ 0.56
TNFRSF1A-204ENST00000440083 HOXB7P09629 217 aa18.56■□□□□ 0.56
TNFRSF1A-204ENST00000440083 TTLL7Q6ZT98 887 aa18.56■□□□□ 0.56
TNFRSF1A-204ENST00000440083 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
TNFRSF1A-204ENST00000440083 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
TNFRSF1A-204ENST00000440083 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-204ENST00000440083 DDR1Q08345 913 aa18.54■□□□□ 0.56
TNFRSF1A-204ENST00000440083 C20orf194Q5TEA3 1177 aa18.54■□□□□ 0.56
TNFRSF1A-204ENST00000440083 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-204ENST00000440083 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
TNFRSF1A-204ENST00000440083 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
TNFRSF1A-204ENST00000440083 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
TNFRSF1A-204ENST00000440083 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1A-204ENST00000440083 FRAT1Q92837 279 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1A-204ENST00000440083 NFIXQ14938 502 aa18.52■□□□□ 0.56
TNFRSF1A-204ENST00000440083 TBC1D9BQ66K14 1250 aa18.52■□□□□ 0.56
TNFRSF1A-204ENST00000440083 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.56
TNFRSF1A-204ENST00000440083 XAGE3Q8WTP9 111 aa18.52■□□□□ 0.56
TNFRSF1A-204ENST00000440083 DDX21Q9NR30 783 aaKnown RBP eCLIP18.52■□□□□ 0.56
TNFRSF1A-204ENST00000440083 SMC4Q9NTJ3 1288 aa18.52■□□□□ 0.56
TNFRSF1A-204ENST00000440083 AIMP1Q12904 312 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-204ENST00000440083 HLFQ16534 295 aa18.51■□□□□ 0.55
TNFRSF1A-204ENST00000440083 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
TNFRSF1A-204ENST00000440083 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
TNFRSF1A-204ENST00000440083 FHDC1Q9C0D6 1143 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-204ENST00000440083 ZBTB3Q9H5J0 574 aa18.51■□□□□ 0.55
TNFRSF1A-204ENST00000440083 MS4A1P11836 297 aa18.5■□□□□ 0.55
TNFRSF1A-204ENST00000440083 TM4SF1P30408 202 aa18.5■□□□□ 0.55
TNFRSF1A-204ENST00000440083 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 KIF6Q6ZMV9 814 aa18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 KIF16BQ96L93 1317 aa18.49■□□□□ 0.55
TNFRSF1A-204ENST00000440083 VAMP4O75379 141 aa18.48■□□□□ 0.55
TNFRSF1A-204ENST00000440083 ALDH1L2Q3SY69 923 aa18.48■□□□□ 0.55
TNFRSF1A-204ENST00000440083 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
TNFRSF1A-204ENST00000440083 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-204ENST00000440083 AFDNP55196 1824 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-204ENST00000440083 NUP98P52948 1817 aa18.47■□□□□ 0.55
TNFRSF1A-204ENST00000440083 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
TNFRSF1A-204ENST00000440083 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
TNFRSF1A-204ENST00000440083 C10orf71Q711Q0 1435 aa18.47■□□□□ 0.55
TNFRSF1A-204ENST00000440083 HYPKQ9NX55 129 aa18.46■□□□□ 0.55
TNFRSF1A-204ENST00000440083 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 GPTP24298 496 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 G2E3Q7L622 706 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 CCDC24Q8N4L8 307 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 SYT17Q9BSW7 474 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ZNF652Q9Y2D9 606 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 NRXN2Q9P2S2 1712 aa18.45■□□□□ 0.54
TNFRSF1A-204ENST00000440083 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ERVV-1B6SEH8 477 aa18.44■□□□□ 0.54
TNFRSF1A-204ENST00000440083 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-204ENST00000440083 SERPINB2P05120 415 aa18.44■□□□□ 0.54
TNFRSF1A-204ENST00000440083 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ATP10DQ9P241 1426 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 STK31Q9BXU1 1019 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 KIF13BQ9NQT8 1826 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
TNFRSF1A-204ENST00000440083 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
TNFRSF1A-204ENST00000440083 AAMPQ13685 434 aa18.42■□□□□ 0.54
TNFRSF1A-204ENST00000440083 GIGYF2Q6Y7W6 1299 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1A-204ENST00000440083 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
TNFRSF1A-204ENST00000440083 RGL2O15211 777 aa18.41■□□□□ 0.54
TNFRSF1A-204ENST00000440083 DZIP1LQ8IYY4 767 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-204ENST00000440083 CD2APQ9Y5K6 639 aa18.41■□□□□ 0.54
TNFRSF1A-204ENST00000440083 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
TNFRSF1A-204ENST00000440083 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
TNFRSF1A-204ENST00000440083 WWC3Q9ULE0 1092 aa18.4■□□□□ 0.54
TNFRSF1A-204ENST00000440083 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-204ENST00000440083 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ANKRD31Q8N7Z5 1873 aa18.39■□□□□ 0.54
TNFRSF1A-204ENST00000440083 ATF7IPQ6VMQ6 1270 aa18.39■□□□□ 0.53
TNFRSF1A-204ENST00000440083 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-204ENST00000440083 CNBD1Q8NA66 436 aa18.39■□□□□ 0.53
TNFRSF1A-204ENST00000440083 CHMP4AQ9BY43 222 aa18.39■□□□□ 0.53
TNFRSF1A-204ENST00000440083 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 MVPQ14764 893 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms