RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
UBR3-205ENST00000439681 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
UBR3-205ENST00000439681 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 LAMB4A4D0S4 1761 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 MAP3K15Q6ZN16 1313 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 A0A087WZG4 1122 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 ERVV-1B6SEH8 477 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 CAMTA2O94983 1202 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 HLFQ16534 295 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 BEND3Q5T5X7 828 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
UBR3-205ENST00000439681 ANO8Q9HCE9 1232 aaPredicted RBP9.5□□□□□ -0.89
UBR3-205ENST00000439681 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 RREB1Q92766 1687 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.5□□□□□ -0.89
UBR3-205ENST00000439681 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 SLC4A10Q6U841 1118 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 KIF6Q6ZMV9 814 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
UBR3-205ENST00000439681 ARXQ96QS3 562 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 CRBNQ96SW2 442 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 COL15A1P39059 1388 aa9.5□□□□□ -0.89
UBR3-205ENST00000439681 COL5A3P25940 1745 aaPredicted RBP9.49□□□□□ -0.89
UBR3-205ENST00000439681 MSH5O43196 834 aa9.49□□□□□ -0.89
UBR3-205ENST00000439681 IGKV5-2P06315 115 aa9.49□□□□□ -0.89
UBR3-205ENST00000439681 ADRA2BP18089 450 aa9.49□□□□□ -0.89
UBR3-205ENST00000439681 SSFA2P28290 1259 aa9.49□□□□□ -0.89
UBR3-205ENST00000439681 GIGYF2Q6Y7W6 1299 aaKnown RBP9.49□□□□□ -0.89
UBR3-205ENST00000439681 BCL2L12Q9HB09 334 aa9.49□□□□□ -0.89
UBR3-205ENST00000439681 NARFQ9UHQ1 456 aa9.49□□□□□ -0.89
UBR3-205ENST00000439681 PHF14O94880 888 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 CCT4P50991 539 aaKnown RBP9.48□□□□□ -0.89
UBR3-205ENST00000439681 TCIRG1Q13488 830 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
UBR3-205ENST00000439681 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 NPM2Q86SE8 214 aaKnown RBP9.48□□□□□ -0.89
UBR3-205ENST00000439681 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 MYD88Q99836 296 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
UBR3-205ENST00000439681 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 MYH14Q7Z406 1995 aaKnown RBP9.48□□□□□ -0.89
UBR3-205ENST00000439681 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
UBR3-205ENST00000439681 LINS1Q8NG48 757 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 ISCA1Q9BUE6 129 aa9.48□□□□□ -0.89
UBR3-205ENST00000439681 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 RGL2O15211 777 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 TRIM28Q13263 835 aaKnown RBP9.47□□□□□ -0.89
UBR3-205ENST00000439681 FKBP8Q14318 412 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 CWF19L2Q2TBE0 894 aaKnown RBP9.47□□□□□ -0.89
UBR3-205ENST00000439681 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 COL23A1Q86Y22 540 aaPredicted RBP9.47□□□□□ -0.89
UBR3-205ENST00000439681 ITPRIPQ8IWB1 547 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 SRCIN1Q9C0H9 1055 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 STK32BQ9NY57 414 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 PNPLA7Q6ZV29 1317 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
UBR3-205ENST00000439681 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 ALDH1L1O75891 902 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 RFC4P35249 363 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 ZNF34Q8IZ26 560 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 USP44Q9H0E7 712 aa9.47□□□□□ -0.89
UBR3-205ENST00000439681 USP42Q9H9J4 1324 aaKnown RBP9.47□□□□□ -0.89
UBR3-205ENST00000439681 ZPR1O75312 459 aa9.46□□□□□ -0.89
UBR3-205ENST00000439681 NEFLP07196 543 aa9.46□□□□□ -0.89
UBR3-205ENST00000439681 NEXNQ0ZGT2 675 aa9.46□□□□□ -0.89
UBR3-205ENST00000439681 TAF1LQ8IZX4 1826 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 GYS1P13807 737 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 GCKRQ14397 625 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 FLAD1Q8NFF5 587 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 RTN4Q9NQC3 1192 aaKnown RBP9.46□□□□□ -0.9
UBR3-205ENST00000439681 ZBTB40Q9NUA8 1239 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 DDX19BQ9UMR2 479 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
UBR3-205ENST00000439681 IBTKQ9P2D0 1353 aaPredicted RBP9.45□□□□□ -0.9
UBR3-205ENST00000439681 GPTP24298 496 aa9.45□□□□□ -0.9
UBR3-205ENST00000439681 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
UBR3-205ENST00000439681 CCDC191Q8NCU4 936 aa9.45□□□□□ -0.9
UBR3-205ENST00000439681 MEIS3Q99687 375 aa9.45□□□□□ -0.9
UBR3-205ENST00000439681 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 ZNF652Q9Y2D9 606 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 UTYO14607 1347 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 UBN2Q6ZU65 1347 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 H7C1W4 665 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 NBPF7P0C2Y1 421 aaPredicted RBP9.44□□□□□ -0.9
UBR3-205ENST00000439681 CASP7P55210 303 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 SUSD4Q5VX71 490 aa9.44□□□□□ -0.9
UBR3-205ENST00000439681 PDGFDQ9GZP0 370 aaPredicted RBP9.44□□□□□ -0.9
UBR3-205ENST00000439681 CWC25Q9NXE8 425 aaPredicted RBP9.44□□□□□ -0.9
UBR3-205ENST00000439681 NIP7Q9Y221 180 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBR3-205ENST00000439681 GRM8O00222 908 aa9.43□□□□□ -0.9
UBR3-205ENST00000439681 TM4SF1P30408 202 aa9.43□□□□□ -0.9
UBR3-205ENST00000439681 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
UBR3-205ENST00000439681 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
UBR3-205ENST00000439681 NFIXQ14938 502 aa9.43□□□□□ -0.9
UBR3-205ENST00000439681 PARP10Q53GL7 1025 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms