RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 PAIP2Q9BPZ3 127 aaKnown RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 MAGEC2Q9UBF1 373 aaPredicted RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 ADGRL1O94910 1474 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 WDR7Q9Y4E6 1490 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 STX6O43752 255 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 USP48Q86UV5 1035 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 OTUD6BQ8N6M0 293 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 NUDT16Q96DE0 195 aaKnown RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 TTC12Q9H892 705 aaPredicted RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 RBM28Q9NW13 759 aaKnown RBP7.44□□□□□ -1.22
BDNF-211ENST00000439476 CTNNA3Q9UI47 895 aa7.44□□□□□ -1.22
BDNF-211ENST00000439476 UBE2HP62256 183 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 AIMP1Q12904 312 aaKnown RBP7.43□□□□□ -1.22
BDNF-211ENST00000439476 STK38Q15208 465 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 NUTM2GQ5VZR2 741 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 RINLQ6ZS11 566 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 EPS15P42566 896 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 WASHC4Q2M389 1173 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 FILIP1Q7Z7B0 1213 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 PPP1R9BQ96SB3 815 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 TRIM22Q8IYM9 498 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 DDX54Q8TDD1 881 aaKnown RBP7.43□□□□□ -1.22
BDNF-211ENST00000439476 PHACTR3Q96KR7 559 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 ESYT1Q9BSJ8 1104 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 LMBRD1Q9NUN5 540 aa7.43□□□□□ -1.22
BDNF-211ENST00000439476 SMC2O95347 1197 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 ZNF853P0CG23 659 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 LRCH2Q5VUJ6 765 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 GIMAP6Q6P9H5 292 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 CAGE1Q8TC20 777 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 PHF23Q9BUL5 403 aaPredicted RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 GBP3Q9H0R5 595 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 LRRFIP2Q9Y608 721 aaKnown RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 SMTNL1A8MU46 457 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 TERF1P54274 439 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 ODF2Q5BJF6 829 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 CEP57L1Q8IYX8 460 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 NACAP1Q9BZK3 213 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 EFCC1Q9HA90 598 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 RAB11FIP3O75154 756 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 GLRX3O76003 335 aaKnown RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 CEP85Q6P2H3 762 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 WASF1Q92558 559 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 C16orf45Q96MC5 204 aaPredicted RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 SH2B1Q9NRF2 756 aaPredicted RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 CALCOCO1Q9P1Z2 691 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 POLKQ9UBT6 870 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 RSPH14Q9UHP6 348 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
BDNF-211ENST00000439476 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 PTPRTO14522 1441 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 CAVIN2O95810 425 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 CCDC158Q5M9N0 1113 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 CKAP2LQ8IYA6 745 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 OTUD7AQ8TE49 926 aaPredicted RBP7.42□□□□□ -1.22
BDNF-211ENST00000439476 FAM212AQ96EL1 285 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 CNPY2Q9Y2B0 182 aa7.42□□□□□ -1.22
BDNF-211ENST00000439476 ZSCAN22P10073 491 aaPredicted RBP7.41□□□□□ -1.22
BDNF-211ENST00000439476 NAP1L1P55209 391 aaKnown RBP7.41□□□□□ -1.22
BDNF-211ENST00000439476 AACSQ86V21 672 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 SGSM3Q96HU1 749 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 NEUROD6Q96NK8 337 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
BDNF-211ENST00000439476 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 MAST1Q9Y2H9 1570 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 GOLGA6L7A0A1B0GV03 622 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 H0YHG0 523 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 FANCAO15360 1455 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 KDM5DQ9BY66 1539 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 NEMFO60524 1076 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 GJB2P29033 226 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 ME1P48163 572 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 FLIIQ13045 1269 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 DNAJC21Q5F1R6 531 aaKnown RBP7.41□□□□□ -1.22
BDNF-211ENST00000439476 NCAPGQ9BPX3 1015 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 A0A1W2PP64 1363 aa7.41□□□□□ -1.22
BDNF-211ENST00000439476 ZRSR2Q15696 482 aaKnown RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 RAI14Q9P0K7 980 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 PRDM15P57071 1507 aaPredicted RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 GOLGA6L10A6NI86 522 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 PTPN14Q15678 1187 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 PDILTQ8N807 584 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 INTS4Q96HW7 963 aaKnown RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 SIL1Q9H173 461 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 ABCC10Q5T3U5 1492 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 CD2BP2O95400 341 aaKnown RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.22
BDNF-211ENST00000439476 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
BDNF-211ENST00000439476 MCM3P25205 808 aa7.4□□□□□ -1.23
BDNF-211ENST00000439476 KRT24Q2M2I5 525 aa7.4□□□□□ -1.23
BDNF-211ENST00000439476 CLIP2Q9UDT6 1046 aa7.4□□□□□ -1.23
BDNF-211ENST00000439476 ARHGEF5Q12774 1597 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms