RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 USP6P35125 1406 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 MBD3O95983 291 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 CHMLP26374 656 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 G3BP1Q13283 466 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 LUZP1Q86V48 1076 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 FMNL2Q96PY5 1086 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 DIP2BQ9P265 1576 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 TBX22Q9Y458 520 aa11.87□□□□□ -0.51
CDC42SE1-202ENST00000439374 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 CASTP20810 708 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 ANKRD24Q8TF21 1146 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 TMX1Q9H3N1 280 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 NRBP1Q9UHY1 535 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 NEUROD6Q96NK8 337 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 IL25Q9H293 177 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
CDC42SE1-202ENST00000439374 CNTROBQ8N137 903 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 GCP02774 474 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 EDC3Q96F86 508 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 CDK12Q9NYV4 1490 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 STK11IPQ8N1F8 1099 aa11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 CWC22Q9HCG8 908 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-202ENST00000439374 MYRIPQ8NFW9 859 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 PHF14O94880 888 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 MYD88Q99836 296 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 MAP3K5Q99683 1374 aa11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 HSP90B1P14625 803 aaKnown RBP11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 SMAP1Q8IYB5 467 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 FAM177A1Q8N128 213 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-202ENST00000439374 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 CERS3Q8IU89 383 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 IGSF1Q8N6C5 1336 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 ST7Q9NRC1 585 aa11.83□□□□□ -0.52
CDC42SE1-202ENST00000439374 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
CDC42SE1-202ENST00000439374 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
CDC42SE1-202ENST00000439374 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
CDC42SE1-202ENST00000439374 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 PTPN21Q16825 1174 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 IP6K1Q92551 441 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 DBF4Q9UBU7 674 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 MED14O60244 1454 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 TNNT1P13805 278 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 AXIN2Q9Y2T1 843 aa11.81□□□□□ -0.52
CDC42SE1-202ENST00000439374 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 DMTNQ08495 405 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 XAGE3Q8WTP9 111 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 FAM227BQ96M60 508 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 ADAMTS13Q76LX8 1427 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 KAT6BQ8WYB5 2073 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 DDX58O95786 925 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 ATF3P18847 181 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 ISM2Q6H9L7 571 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 CCAR2Q8N163 923 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 SIRT1Q96EB6 747 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 AP5Z1O43299 807 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 LARGE1O95461 756 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 SYT1P21579 422 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 AK2P54819 239 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms