RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 ZNF397Q8NF99 534 aaPredicted RBP21.48■■□□□ 1.03
KCNC4-204ENST00000438661 MTMR6Q9Y217 621 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 A2ML1A8K2U0 1454 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 GNAI2P04899 355 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 ZNF75DP51815 510 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 SYCP1Q15431 976 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
KCNC4-204ENST00000438661 TTC6Q86TZ1 520 aa21.47■■□□□ 1.03
KCNC4-204ENST00000438661 SYTL4Q96C24 671 aaPredicted RBP21.47■■□□□ 1.03
KCNC4-204ENST00000438661 DNAJC25Q9H1X3 360 aa21.47■■□□□ 1.03
KCNC4-204ENST00000438661 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
KCNC4-204ENST00000438661 NUTM2FA1L443 756 aa21.46■■□□□ 1.03
KCNC4-204ENST00000438661 SOX12O15370 315 aa21.46■■□□□ 1.03
KCNC4-204ENST00000438661 PDIA4P13667 645 aaKnown RBP21.46■■□□□ 1.03
KCNC4-204ENST00000438661 CWC27Q6UX04 472 aaKnown RBP21.46■■□□□ 1.03
KCNC4-204ENST00000438661 CHL1O00533 1208 aa21.46■■□□□ 1.03
KCNC4-204ENST00000438661 RBM6P78332 1123 aaKnown RBP21.46■■□□□ 1.03
KCNC4-204ENST00000438661 PTPN14Q15678 1187 aa21.46■■□□□ 1.03
KCNC4-204ENST00000438661 TRIM34Q9BYJ4 488 aa21.45■■□□□ 1.03
KCNC4-204ENST00000438661 FILIP1Q7Z7B0 1213 aa21.45■■□□□ 1.02
KCNC4-204ENST00000438661 CERS3Q8IU89 383 aa21.45■■□□□ 1.02
KCNC4-204ENST00000438661 CAPN2P17655 700 aa21.45■■□□□ 1.02
KCNC4-204ENST00000438661 ZNF165P49910 485 aa21.45■■□□□ 1.02
KCNC4-204ENST00000438661 CALCOCO1Q9P1Z2 691 aa21.44■■□□□ 1.02
KCNC4-204ENST00000438661 HSP90AB2PQ58FF8 381 aa21.43■■□□□ 1.02
KCNC4-204ENST00000438661 LARP1BQ659C4 914 aaKnown RBP21.43■■□□□ 1.02
KCNC4-204ENST00000438661 TTC14Q96N46 770 aa21.43■■□□□ 1.02
KCNC4-204ENST00000438661 DNAJC2Q99543 621 aaKnown RBP21.43■■□□□ 1.02
KCNC4-204ENST00000438661 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
KCNC4-204ENST00000438661 RIMBP3CA6NJZ7 1639 aa21.43■■□□□ 1.02
KCNC4-204ENST00000438661 RIMBP3BA6NNM3 1639 aa21.43■■□□□ 1.02
KCNC4-204ENST00000438661 RIMBP3Q9UFD9 1639 aa21.43■■□□□ 1.02
KCNC4-204ENST00000438661 NOL10Q9BSC4 688 aaKnown RBP21.42■■□□□ 1.02
KCNC4-204ENST00000438661 RAD50Q92878 1312 aa21.42■■□□□ 1.02
KCNC4-204ENST00000438661 PTPRCP08575 1304 aa21.42■■□□□ 1.02
KCNC4-204ENST00000438661 KRT85P78386 507 aa21.42■■□□□ 1.02
KCNC4-204ENST00000438661 SALL3Q9BXA9 1300 aa21.42■■□□□ 1.02
KCNC4-204ENST00000438661 JAKMIP1Q96N16 626 aaKnown RBP21.42■■□□□ 1.02
KCNC4-204ENST00000438661 SKILP12757 684 aa21.41■■□□□ 1.02
KCNC4-204ENST00000438661 FBXW7Q969H0 707 aa21.41■■□□□ 1.02
KCNC4-204ENST00000438661 PLA2G4DQ86XP0 818 aa21.41■■□□□ 1.02
KCNC4-204ENST00000438661 FOXO3O43524 673 aa21.4■■□□□ 1.02
KCNC4-204ENST00000438661 HNRNPH2P55795 449 aaKnown RBP21.4■■□□□ 1.02
KCNC4-204ENST00000438661 CDC37L1Q7L3B6 337 aa21.4■■□□□ 1.02
KCNC4-204ENST00000438661 USP16Q9Y5T5 823 aa21.4■■□□□ 1.02
KCNC4-204ENST00000438661 ADCK5Q3MIX3 580 aa21.4■■□□□ 1.02
KCNC4-204ENST00000438661 BICD2Q8TD16 824 aa21.4■■□□□ 1.02
KCNC4-204ENST00000438661 PDRG1Q9NUG6 133 aa21.4■■□□□ 1.02
KCNC4-204ENST00000438661 A0A087WWV3 80 aa21.39■■□□□ 1.02
KCNC4-204ENST00000438661 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.02
KCNC4-204ENST00000438661 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.02
KCNC4-204ENST00000438661 POLR3GO15318 223 aaPredicted RBP21.39■■□□□ 1.01
KCNC4-204ENST00000438661 ERCC6LQ2NKX8 1250 aa21.39■■□□□ 1.01
KCNC4-204ENST00000438661 LRRC8AQ8IWT6 810 aa21.39■■□□□ 1.01
KCNC4-204ENST00000438661 ZNF446Q9NWS9 450 aa21.39■■□□□ 1.01
KCNC4-204ENST00000438661 HYPKQ9NX55 129 aa21.39■■□□□ 1.01
KCNC4-204ENST00000438661 SETD1AO15047 1707 aaKnown RBP21.39■■□□□ 1.01
KCNC4-204ENST00000438661 GOLGA6L19H0YKK7 550 aa21.39■■□□□ 1.01
KCNC4-204ENST00000438661 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
KCNC4-204ENST00000438661 SPATA32Q96LK8 384 aa21.38■■□□□ 1.01
KCNC4-204ENST00000438661 TCEANC2Q96MN5 208 aa21.38■■□□□ 1.01
KCNC4-204ENST00000438661 SGSM2O43147 1006 aa21.38■■□□□ 1.01
KCNC4-204ENST00000438661 NR1I2O75469 434 aa21.38■■□□□ 1.01
KCNC4-204ENST00000438661 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
KCNC4-204ENST00000438661 GORABQ5T7V8 394 aa21.37■■□□□ 1.01
KCNC4-204ENST00000438661 ZBTB9Q96C00 473 aa21.37■■□□□ 1.01
KCNC4-204ENST00000438661 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
KCNC4-204ENST00000438661 ME3Q16798 604 aa21.36■■□□□ 1.01
KCNC4-204ENST00000438661 ZFP91Q96JP5 570 aaPredicted RBP21.36■■□□□ 1.01
KCNC4-204ENST00000438661 SSH2Q76I76 1423 aa21.36■■□□□ 1.01
KCNC4-204ENST00000438661 TTC21BQ7Z4L5 1316 aa21.36■■□□□ 1.01
KCNC4-204ENST00000438661 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
KCNC4-204ENST00000438661 SURF6O75683 361 aaKnown RBP21.36■■□□□ 1.01
KCNC4-204ENST00000438661 CEBPZQ03701 1054 aaKnown RBP21.36■■□□□ 1.01
KCNC4-204ENST00000438661 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
KCNC4-204ENST00000438661 ERO1AQ96HE7 468 aa21.36■■□□□ 1.01
KCNC4-204ENST00000438661 LSG1Q9H089 658 aaKnown RBP21.36■■□□□ 1.01
KCNC4-204ENST00000438661 SLU7O95391 586 aaKnown RBP21.36■■□□□ 1.01
KCNC4-204ENST00000438661 LRRN4CLQ8ND94 238 aa21.35■■□□□ 1.01
KCNC4-204ENST00000438661 ACEP12821 1306 aa21.35■■□□□ 1.01
KCNC4-204ENST00000438661 CCDC69A6NI79 296 aa21.34■■□□□ 1.01
KCNC4-204ENST00000438661 ATP8B2P98198 1209 aa21.34■■□□□ 1.01
KCNC4-204ENST00000438661 NEK11Q8NG66 645 aa21.34■■□□□ 1.01
KCNC4-204ENST00000438661 STK3Q13188 491 aa21.34■■□□□ 1.01
KCNC4-204ENST00000438661 STAP2Q9UGK3 403 aa21.34■■□□□ 1.01
KCNC4-204ENST00000438661 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
KCNC4-204ENST00000438661 TNNT3P45378 269 aaPredicted RBP21.33■■□□□ 1.01
KCNC4-204ENST00000438661 PTH1RQ03431 593 aa21.33■■□□□ 1.01
KCNC4-204ENST00000438661 TDRD7Q8NHU6 1098 aaKnown RBP21.33■■□□□ 1.01
KCNC4-204ENST00000438661 CCDC171Q6TFL3 1326 aa21.33■■□□□ 1.01
KCNC4-204ENST00000438661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.33■■□□□ 1.01
KCNC4-204ENST00000438661 CYP46A1Q9Y6A2 500 aa21.33■■□□□ 1.01
KCNC4-204ENST00000438661 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1.01
KCNC4-204ENST00000438661 MON2Q7Z3U7 1717 aa21.33■■□□□ 1
KCNC4-204ENST00000438661 ST3GAL1Q11201 340 aa21.33■■□□□ 1
KCNC4-204ENST00000438661 BMS1Q14692 1282 aaKnown RBP21.33■■□□□ 1
KCNC4-204ENST00000438661 MTHFSDQ2M296 383 aaKnown RBP21.33■■□□□ 1
KCNC4-204ENST00000438661 BECN2A8MW95 431 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms