RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PSME1Q06323 249 aa5.97□□□□□ -1.45
HMGB1P12-201ENST00000438594 SEMA3FQ13275 785 aa5.97□□□□□ -1.45
HMGB1P12-201ENST00000438594 IRF5Q13568 498 aa5.97□□□□□ -1.45
HMGB1P12-201ENST00000438594 GRIK4Q16099 956 aa5.97□□□□□ -1.45
HMGB1P12-201ENST00000438594 C8orf86Q6ZUL3 223 aa5.97□□□□□ -1.45
HMGB1P12-201ENST00000438594 ZNF232Q9UNY5 417 aa5.97□□□□□ -1.45
HMGB1P12-201ENST00000438594 LOC105371045A0A1W2PR82 267 aa5.96□□□□□ -1.46
HMGB1P12-201ENST00000438594 ABL2P42684 1182 aa5.96□□□□□ -1.46
HMGB1P12-201ENST00000438594 LAMC2Q13753 1193 aa5.96□□□□□ -1.46
HMGB1P12-201ENST00000438594 PRSS36Q5K4E3 855 aa5.96□□□□□ -1.46
HMGB1P12-201ENST00000438594 SAMD5Q5TGI4 173 aa5.96□□□□□ -1.46
HMGB1P12-201ENST00000438594 IQSEC3Q9UPP2 1182 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P12-201ENST00000438594 BACH1O14867 736 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 EFSO43281 561 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 ALBP02768 609 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 TBC1D8BQ0IIM8 1120 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 SFSWAPQ12872 951 aaKnown RBP5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 MTFR1Q15390 333 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 TRAPPC3LQ5T215 181 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 ARTNQ5T4W7 220 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 RAB44Q7Z6P3 723 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 SLC4A9Q96Q91 983 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 SLC30A3Q99726 388 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 CHIC2Q9UKJ5 165 aa5.95□□□□□ -1.46
HMGB1P12-201ENST00000438594 SIN3BO75182 1162 aa5.94□□□□□ -1.46
HMGB1P12-201ENST00000438594 NEUROD1Q13562 356 aa5.94□□□□□ -1.46
HMGB1P12-201ENST00000438594 TBCELQ5QJ74 424 aa5.94□□□□□ -1.46
HMGB1P12-201ENST00000438594 ZNF295-AS1Q8N0V1 137 aa5.94□□□□□ -1.46
HMGB1P12-201ENST00000438594 L3MBTL2Q969R5 705 aa5.94□□□□□ -1.46
HMGB1P12-201ENST00000438594 GDPD2Q9HCC8 539 aa5.94□□□□□ -1.46
HMGB1P12-201ENST00000438594 ADH7P40394 386 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 EML3Q32P44 896 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 KRTAP1-3Q8IUG1 177 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 RHPN1Q8TCX5 695 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 ZDHHC1Q8WTX9 485 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 IGFLR1Q9H665 355 aa5.93□□□□□ -1.46
HMGB1P12-201ENST00000438594 ADARB2-AS1A8MUL3 147 aa5.92□□□□□ -1.46
HMGB1P12-201ENST00000438594 NOS2P35228 1153 aa5.92□□□□□ -1.46
HMGB1P12-201ENST00000438594 BRPF1P55201 1214 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P12-201ENST00000438594 SPEM2Q0P670 501 aa5.92□□□□□ -1.46
HMGB1P12-201ENST00000438594 NOD1Q9Y239 953 aa5.92□□□□□ -1.46
HMGB1P12-201ENST00000438594 STARD13Q9Y3M8 1113 aa5.92□□□□□ -1.46
HMGB1P12-201ENST00000438594 C9orf172C9J069 976 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 PIK3CDO00329 1044 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 SKIP12755 728 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 GTF2IP78347 998 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 WASHC4Q2M389 1173 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 SLC9A9Q8IVB4 645 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 TNFRSF25Q93038 417 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 CEP63Q96MT8 703 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 ZNF358Q9NW07 568 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 SCHIP1Q9P0W5 487 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 PCDHGA11Q9Y5H2 935 aa5.91□□□□□ -1.46
HMGB1P12-201ENST00000438594 LILRB5O75023 590 aa5.9□□□□□ -1.46
HMGB1P12-201ENST00000438594 NID1P14543 1247 aa5.9□□□□□ -1.46
HMGB1P12-201ENST00000438594 TEAD4Q15561 434 aa5.9□□□□□ -1.46
HMGB1P12-201ENST00000438594 TNS4Q8IZW8 715 aa5.9□□□□□ -1.46
HMGB1P12-201ENST00000438594 BHMTQ93088 406 aa5.9□□□□□ -1.46
HMGB1P12-201ENST00000438594 BRD7Q9NPI1 651 aa5.9□□□□□ -1.46
HMGB1P12-201ENST00000438594 SERTM1A2A2V5 107 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 SFI1A8K8P3 1242 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 EML1O00423 815 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 RAC1P63000 192 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 COL9A3Q14050 684 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 NUDT8Q8WV74 236 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 TP53INP1Q96A56 240 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 HSH2DQ96JZ2 352 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 MDFIQ99750 246 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 UBE2OQ9C0C9 1292 aaKnown RBP5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 PRDM6Q9NQX0 595 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 USP21Q9UK80 565 aa5.89□□□□□ -1.47
HMGB1P12-201ENST00000438594 SOX11P35716 441 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 LRP8Q14114 963 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 MBTPS1Q14703 1052 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 SH3PXD2AQ5TCZ1 1133 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 TXNRD3Q86VQ6 643 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 JPH1Q9HDC5 661 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 KCNH4Q9UQ05 1017 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 CHMP3Q9Y3E7 222 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 HCN4Q9Y3Q4 1203 aa5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 CCDC9Q9Y3X0 531 aaKnown RBP5.88□□□□□ -1.47
HMGB1P12-201ENST00000438594 A0A0A0MRY4 1105 aa5.87□□□□□ -1.47
HMGB1P12-201ENST00000438594 H2AFB1P0C5Y9 115 aa5.87□□□□□ -1.47
HMGB1P12-201ENST00000438594 H2AFB2P0C5Z0 115 aa5.87□□□□□ -1.47
HMGB1P12-201ENST00000438594 SELPP16109 830 aa5.87□□□□□ -1.47
HMGB1P12-201ENST00000438594 ADGRE1Q14246 886 aa5.87□□□□□ -1.47
HMGB1P12-201ENST00000438594 DEPDC4Q8N2C3 294 aa5.87□□□□□ -1.47
HMGB1P12-201ENST00000438594 HYAL3O43820 417 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P12-201ENST00000438594 ELNP15502 786 aa5.86□□□□□ -1.47
HMGB1P12-201ENST00000438594 NRG1Q02297 640 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P12-201ENST00000438594 NCOA4Q13772 614 aa5.86□□□□□ -1.47
HMGB1P12-201ENST00000438594 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
HMGB1P12-201ENST00000438594 GPC6Q9Y625 555 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P12-201ENST00000438594 C20orf204Q6ZNR8 217 aa5.85□□□□□ -1.47
HMGB1P12-201ENST00000438594 DMRTC2Q8IXT2 367 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P12-201ENST00000438594 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms