RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 ANKRD24Q8TF21 1146 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 BICD1Q96G01 975 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 CWC25Q9NXE8 425 aaPredicted RBP11.99□□□□□ -0.49
SHPRH-206ENST00000438092 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 CTNNA2P26232 953 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
SHPRH-206ENST00000438092 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
SHPRH-206ENST00000438092 GOLGA6L10A0A0M3HER8 536 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 PRPF4BQ13523 1007 aaKnown RBP11.98□□□□□ -0.49
SHPRH-206ENST00000438092 UBE4AQ14139 1066 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 ZNF354CQ86Y25 554 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 CABP5Q9NP86 173 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 HYPKQ9NX55 129 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 TRMT1Q9NXH9 659 aaKnown RBP11.98□□□□□ -0.49
SHPRH-206ENST00000438092 CCDC148Q8NFR7 591 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 BACH2Q9BYV9 841 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 WDR97A6NE52 1622 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 TERF1P54274 439 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 SLC26A6Q9BXS9 759 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
SHPRH-206ENST00000438092 PRC1O43663 620 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 MYO1BO43795 1136 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 CDC5LQ99459 802 aaKnown RBP11.97□□□□□ -0.49
SHPRH-206ENST00000438092 VEZTQ9HBM0 779 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 BAG4O95429 457 aaKnown RBP11.97□□□□□ -0.49
SHPRH-206ENST00000438092 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
SHPRH-206ENST00000438092 CETN2P41208 172 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 WASLO00401 505 aaPredicted RBP11.97□□□□□ -0.49
SHPRH-206ENST00000438092 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
SHPRH-206ENST00000438092 DPH6Q7L8W6 267 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 ERLIN1O75477 346 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 CASQ1P31415 396 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 EHMT1Q9H9B1 1298 aa11.97□□□□□ -0.49
SHPRH-206ENST00000438092 PI4KAP2A4QPH2 592 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 HSP90AA4PQ58FG1 418 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 PI4KAP1Q8N8J0 262 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 HMGN5P82970 282 aaKnown RBP11.96□□□□□ -0.49
SHPRH-206ENST00000438092 DNAI2Q9GZS0 605 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.49
SHPRH-206ENST00000438092 HLA-DOAP06340 250 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 IQCEQ6IPM2 695 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 PPP1R42Q7Z4L9 355 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 ZBTB9Q96C00 473 aa11.96□□□□□ -0.49
SHPRH-206ENST00000438092 TMCO5BA8MYB1 307 aa11.96□□□□□ -0.5
SHPRH-206ENST00000438092 KIF20AO95235 890 aa11.96□□□□□ -0.5
SHPRH-206ENST00000438092 USP16Q9Y5T5 823 aa11.96□□□□□ -0.5
SHPRH-206ENST00000438092 FLIIQ13045 1269 aa11.96□□□□□ -0.5
SHPRH-206ENST00000438092 RAB34Q9BZG1 259 aa11.96□□□□□ -0.5
SHPRH-206ENST00000438092 MAP2K1Q02750 393 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 CCDC40Q4G0X9 1142 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 FSIP1Q8NA03 581 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 BAG3O95817 575 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 LUZP1Q86V48 1076 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 IFNL2Q8IZJ0 200 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 RGS22Q8NE09 1264 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 EIF3JO75822 258 aaKnown RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 NOP2P46087 812 aaKnown RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 C16orf71Q8IYS4 520 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 IDI1Q13907 227 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 CALML4Q96GE6 196 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 URI1O94763 535 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 AKNAD1Q5T1N1 836 aa11.95□□□□□ -0.5
SHPRH-206ENST00000438092 RNF41Q9H4P4 317 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-206ENST00000438092 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 SERPINA10Q9UK55 444 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
SHPRH-206ENST00000438092 PDE4BQ07343 736 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 GJB2P29033 226 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 IFFO1Q0D2I5 559 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 MCM4P33991 863 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 FAM135AQ9P2D6 1515 aa11.94□□□□□ -0.5
SHPRH-206ENST00000438092 CYP7A1P22680 504 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 METAP2P50579 478 aaKnown RBP eCLIP11.93□□□□□ -0.5
SHPRH-206ENST00000438092 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 TCEANC2Q96MN5 208 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 SSFA2P28290 1259 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 SP4Q02446 784 aa11.93□□□□□ -0.5
SHPRH-206ENST00000438092 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms