RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 LINC00116Q8NCU8 138 aa11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 PIGBQ92521 554 aa11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 L3MBTL2Q969R5 705 aa11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 NPDC1Q9NQX5 325 aaPredicted RBP11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 RNF181Q9P0P0 153 aa11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 FAM208AQ9UK61 1670 aaKnown RBP11.67□□□□□ -0.54
R3HDM1-208ENST00000438014 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 DALRD3Q5D0E6 543 aaKnown RBP11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 PUS7Q96PZ0 661 aaKnown RBP11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
R3HDM1-208ENST00000438014 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
R3HDM1-208ENST00000438014 CYP27B1O15528 508 aa11.65□□□□□ -0.54
R3HDM1-208ENST00000438014 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
R3HDM1-208ENST00000438014 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
R3HDM1-208ENST00000438014 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
R3HDM1-208ENST00000438014 PCDHGA10Q9Y5H3 936 aa11.65□□□□□ -0.54
R3HDM1-208ENST00000438014 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.55
R3HDM1-208ENST00000438014 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
R3HDM1-208ENST00000438014 FBLN1P23142 703 aa11.64□□□□□ -0.55
R3HDM1-208ENST00000438014 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
R3HDM1-208ENST00000438014 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
R3HDM1-208ENST00000438014 ZC3H4Q9UPT8 1303 aaKnown RBP11.63□□□□□ -0.55
R3HDM1-208ENST00000438014 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
R3HDM1-208ENST00000438014 KCNA3P22001 575 aa11.63□□□□□ -0.55
R3HDM1-208ENST00000438014 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
R3HDM1-208ENST00000438014 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
R3HDM1-208ENST00000438014 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
R3HDM1-208ENST00000438014 MS4A1P11836 297 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 RFC4P35249 363 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 ITPK1Q13572 414 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 SPG7Q9UQ90 795 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 TAF1LQ8IZX4 1826 aa11.62□□□□□ -0.55
R3HDM1-208ENST00000438014 GLTPD2A6NH11 291 aa11.61□□□□□ -0.55
R3HDM1-208ENST00000438014 CLCN1P35523 988 aa11.61□□□□□ -0.55
R3HDM1-208ENST00000438014 RRS1Q15050 365 aaKnown RBP11.61□□□□□ -0.55
R3HDM1-208ENST00000438014 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
R3HDM1-208ENST00000438014 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
R3HDM1-208ENST00000438014 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
R3HDM1-208ENST00000438014 GYS1P13807 737 aa11.6□□□□□ -0.55
R3HDM1-208ENST00000438014 REPIN1Q9BWE0 567 aaKnown RBP11.6□□□□□ -0.55
R3HDM1-208ENST00000438014 RPS6KA4O75676 772 aa11.59□□□□□ -0.55
R3HDM1-208ENST00000438014 HSP90AB2PQ58FF8 381 aa11.59□□□□□ -0.55
R3HDM1-208ENST00000438014 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
R3HDM1-208ENST00000438014 TOGARAM1Q9Y4F4 1720 aa11.59□□□□□ -0.55
R3HDM1-208ENST00000438014 INSRP06213 1382 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 LMNB1P20700 586 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 CTCFP49711 727 aaPredicted RBP11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 AIDAQ96BJ3 306 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 ATG3Q9NT62 314 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
R3HDM1-208ENST00000438014 N4BP2Q86UW6 1770 aaPredicted RBP11.57□□□□□ -0.56
R3HDM1-208ENST00000438014 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
R3HDM1-208ENST00000438014 IFNL2Q8IZJ0 200 aa11.57□□□□□ -0.56
R3HDM1-208ENST00000438014 PCMTD1Q96MG8 357 aaPredicted RBP11.57□□□□□ -0.56
R3HDM1-208ENST00000438014 TMUB1Q9BVT8 246 aa11.57□□□□□ -0.56
R3HDM1-208ENST00000438014 FOXN1O15353 648 aa11.56□□□□□ -0.56
R3HDM1-208ENST00000438014 FLIIQ13045 1269 aa11.56□□□□□ -0.56
R3HDM1-208ENST00000438014 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
R3HDM1-208ENST00000438014 CNTNAP4Q9C0A0 1308 aa11.56□□□□□ -0.56
R3HDM1-208ENST00000438014 TNRC6CQ9HCJ0 1690 aaKnown RBP11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 FYB1O15117 783 aa11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 CHRNA5P30532 468 aa11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
R3HDM1-208ENST00000438014 FLT4P35916 1363 aa11.54□□□□□ -0.56
R3HDM1-208ENST00000438014 RGPD2P0DJD1 1756 aa11.54□□□□□ -0.56
R3HDM1-208ENST00000438014 OATP04181 439 aa11.54□□□□□ -0.56
R3HDM1-208ENST00000438014 FOSBP53539 338 aa11.54□□□□□ -0.56
R3HDM1-208ENST00000438014 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
R3HDM1-208ENST00000438014 POTEHQ6S545 545 aa11.54□□□□□ -0.56
R3HDM1-208ENST00000438014 C4AP0C0L4 1744 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 PHKG2P15735 406 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 RASSF7Q02833 373 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
R3HDM1-208ENST00000438014 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
R3HDM1-208ENST00000438014 ITGB4P16144 1822 aa11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 POTECB2RU33 542 aa11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 MLLT1Q03111 559 aaPredicted RBP11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms