RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
CD4-202ENST00000437800 ZNF831Q5JPB2 1677 aa18.37■□□□□ 0.53
CD4-202ENST00000437800 MYL6BP14649 208 aa18.37■□□□□ 0.53
CD4-202ENST00000437800 FLIIQ13045 1269 aa18.37■□□□□ 0.53
CD4-202ENST00000437800 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
CD4-202ENST00000437800 BCL11BQ9C0K0 894 aaPredicted RBP18.37■□□□□ 0.53
CD4-202ENST00000437800 KCNQ4P56696 695 aa18.37■□□□□ 0.53
CD4-202ENST00000437800 A1BGP04217 495 aa18.36■□□□□ 0.53
CD4-202ENST00000437800 ITPK1Q13572 414 aa18.36■□□□□ 0.53
CD4-202ENST00000437800 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
CD4-202ENST00000437800 ATP6V1AP38606 617 aa18.35■□□□□ 0.53
CD4-202ENST00000437800 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
CD4-202ENST00000437800 NBPF26B4DH59 902 aa18.35■□□□□ 0.53
CD4-202ENST00000437800 FKBP5Q13451 457 aaPredicted RBP18.35■□□□□ 0.53
CD4-202ENST00000437800 NBPF14Q5TI25 921 aa18.35■□□□□ 0.53
CD4-202ENST00000437800 NBPF10Q6P3W6 841 aaKnown RBP18.35■□□□□ 0.53
CD4-202ENST00000437800 NBPF15Q8N660 670 aa18.35■□□□□ 0.53
CD4-202ENST00000437800 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
CD4-202ENST00000437800 N4BP2Q86UW6 1770 aaPredicted RBP18.34■□□□□ 0.53
CD4-202ENST00000437800 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
CD4-202ENST00000437800 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
CD4-202ENST00000437800 RREB1Q92766 1687 aa18.34■□□□□ 0.53
CD4-202ENST00000437800 F6X3S4 739 aa18.34■□□□□ 0.53
CD4-202ENST00000437800 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
CD4-202ENST00000437800 LRP10Q7Z4F1 713 aa18.34■□□□□ 0.53
CD4-202ENST00000437800 FRAT2O75474 233 aaPredicted RBP18.33■□□□□ 0.52
CD4-202ENST00000437800 STARD3NLO95772 234 aa18.32■□□□□ 0.52
CD4-202ENST00000437800 AIMP1Q12904 312 aaKnown RBP18.32■□□□□ 0.52
CD4-202ENST00000437800 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
CD4-202ENST00000437800 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
CD4-202ENST00000437800 CLCN1P35523 988 aa18.32■□□□□ 0.52
CD4-202ENST00000437800 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
CD4-202ENST00000437800 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
CD4-202ENST00000437800 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
CD4-202ENST00000437800 ARFGEF2Q9Y6D5 1785 aa18.32■□□□□ 0.52
CD4-202ENST00000437800 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
CD4-202ENST00000437800 ZNF330Q9Y3S2 320 aaPredicted RBP18.31■□□□□ 0.52
CD4-202ENST00000437800 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
CD4-202ENST00000437800 ADCY9O60503 1353 aa18.31■□□□□ 0.52
CD4-202ENST00000437800 LINC00116Q8NCU8 138 aa18.31■□□□□ 0.52
CD4-202ENST00000437800 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
CD4-202ENST00000437800 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
CD4-202ENST00000437800 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
CD4-202ENST00000437800 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
CD4-202ENST00000437800 C1orf115Q9H7X2 142 aa18.29■□□□□ 0.52
CD4-202ENST00000437800 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
CD4-202ENST00000437800 PXDNLA1KZ92 1463 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
CD4-202ENST00000437800 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
CD4-202ENST00000437800 NUCB1Q02818 461 aa18.27■□□□□ 0.52
CD4-202ENST00000437800 INTS5Q6P9B9 1019 aaKnown RBP18.27■□□□□ 0.52
CD4-202ENST00000437800 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.52
CD4-202ENST00000437800 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
CD4-202ENST00000437800 APBA3O96018 575 aa18.26■□□□□ 0.51
CD4-202ENST00000437800 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
CD4-202ENST00000437800 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
CD4-202ENST00000437800 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
CD4-202ENST00000437800 DNAAF4Q8WXU2 420 aa18.25■□□□□ 0.51
CD4-202ENST00000437800 MEIS3Q99687 375 aa18.25■□□□□ 0.51
CD4-202ENST00000437800 C22orf23Q9BZE7 217 aa18.25■□□□□ 0.51
CD4-202ENST00000437800 AFDNP55196 1824 aaKnown RBP18.25■□□□□ 0.51
CD4-202ENST00000437800 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
CD4-202ENST00000437800 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
CD4-202ENST00000437800 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
CD4-202ENST00000437800 GCC1Q96CN9 775 aa18.24■□□□□ 0.51
CD4-202ENST00000437800 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
CD4-202ENST00000437800 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
CD4-202ENST00000437800 SMIM5Q71RC9 77 aa18.23■□□□□ 0.51
CD4-202ENST00000437800 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
CD4-202ENST00000437800 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
CD4-202ENST00000437800 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
CD4-202ENST00000437800 ARXQ96QS3 562 aa18.22■□□□□ 0.51
CD4-202ENST00000437800 TXNRD1Q16881 649 aa18.22■□□□□ 0.51
CD4-202ENST00000437800 PROM2Q8N271 834 aa18.22■□□□□ 0.51
CD4-202ENST00000437800 COL15A1P39059 1388 aa18.22■□□□□ 0.51
CD4-202ENST00000437800 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
CD4-202ENST00000437800 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
CD4-202ENST00000437800 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
CD4-202ENST00000437800 EIF5P55010 431 aaKnown RBP18.21■□□□□ 0.51
CD4-202ENST00000437800 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
CD4-202ENST00000437800 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
CD4-202ENST00000437800 NUP98P52948 1817 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 ANKRD36CQ5JPF3 1778 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 GNPATO15228 680 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 BEND3Q5T5X7 828 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 CEP85Q6P2H3 762 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 RBM25P49756 843 aaKnown RBP18.2■□□□□ 0.5
CD4-202ENST00000437800 CWF19L2Q2TBE0 894 aaKnown RBP18.2■□□□□ 0.5
CD4-202ENST00000437800 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 RPAP2Q8IXW5 612 aaPredicted RBP18.2■□□□□ 0.5
CD4-202ENST00000437800 MYD88Q99836 296 aa18.2■□□□□ 0.5
CD4-202ENST00000437800 SCN7AQ01118 1682 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms