RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 ELOA2Q8IYF1 753 aaPredicted RBP7.63□□□□□ -1.19
MCF2-205ENST00000437564 BAG1Q99933 345 aaPredicted RBP7.63□□□□□ -1.19
MCF2-205ENST00000437564 UHRF1BP1LA0JNW5 1464 aa7.63□□□□□ -1.19
MCF2-205ENST00000437564 ZSCAN9O15535 394 aaPredicted RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 KCNA2P16389 499 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 STIP1P31948 543 aaKnown RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 APLP1P51693 650 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 DEUP1Q05D60 604 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 PDE4DQ08499 809 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 CLEC17AQ6ZS10 378 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 SDCCAG8Q86SQ7 713 aaPredicted RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 MIPOL1Q8TD10 442 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 DDX27Q96GQ7 796 aaKnown RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 SCUBE2Q9NQ36 999 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 HOMER3Q9NSC5 361 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 USP25Q9UHP3 1055 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 PUF60Q9UHX1 559 aaKnown RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 METRNQ9UJH8 293 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 LRRFIP2Q9Y608 721 aaKnown RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 F8VZ95 297 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 U2SURPO15042 1029 aaKnown RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 PEX14O75381 377 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 ERLIN1O75477 346 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 GJA8P48165 433 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 GOLGA2Q08379 1002 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 PRPF4BQ13523 1007 aaKnown RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
MCF2-205ENST00000437564 GBP6Q6ZN66 633 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 FILIP1Q7Z7B0 1213 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 IFNL1Q8IU54 200 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 ERC1Q8IUD2 1116 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 ANKRD18AQ8IVF6 992 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 STAG2Q8N3U4 1231 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 MICAL1Q8TDZ2 1067 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 COMMD10Q9Y6G5 202 aa7.62□□□□□ -1.19
MCF2-205ENST00000437564 ZMYM3Q14202 1370 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 WDR97A6NE52 1622 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 KIF2AO00139 706 aaPredicted RBP7.61□□□□□ -1.19
MCF2-205ENST00000437564 KCNA1Q09470 495 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 MKRN3Q13064 507 aaKnown RBP7.61□□□□□ -1.19
MCF2-205ENST00000437564 ZNF394Q53GI3 561 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 KCNV1Q6PIU1 500 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 AMOTL1Q8IY63 956 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 LCMT1Q9UIC8 334 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 USP19O94966 1318 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 KDM2BQ8NHM5 1336 aa7.61□□□□□ -1.19
MCF2-205ENST00000437564 ANKRD62A6NC57 917 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 SMTNL1A8MU46 457 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 H7C1W4 665 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 ZNF24P17028 368 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 TPP2P29144 1249 aaPredicted RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 CDR1P51861 262 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 CORO7P57737 925 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 CAVIN1Q6NZI2 390 aaKnown RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 CCDC80Q76M96 950 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 KIAA1328Q86T90 577 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 CDAN1Q8IWY9 1227 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 SMC5Q8IY18 1101 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 JARID2Q92833 1246 aaPredicted RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.6□□□□□ -1.19
MCF2-205ENST00000437564 A0A1B0GUA9 196 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 BICDL2A1A5D9 508 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 E2F6O75461 281 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 SASH1O94885 1247 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 FMNL1O95466 1100 aaPredicted RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 POTEJP0CG39 1038 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 HARSP12081 509 aaKnown RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 XBP1P17861 261 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 MNAT1P51948 309 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 MRPL12P52815 198 aaKnown RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 RBM6P78332 1123 aaKnown RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 E2F5Q15329 346 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 NBPF8Q3BBV2 869 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 KCNB2Q92953 911 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 MS4A4AQ96JQ5 239 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 ATP8A1Q9Y2Q0 1164 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 CTDP1Q9Y5B0 961 aaPredicted RBP7.6□□□□□ -1.19
MCF2-205ENST00000437564 TNIKQ9UKE5 1360 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 MYOM3Q5VTT5 1437 aa7.6□□□□□ -1.19
MCF2-205ENST00000437564 RPS6KA5O75582 802 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 FCHSD2O94868 740 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 RLBP1P12271 317 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 SYNE3Q6ZMZ3 975 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 UTP14AQ9BVJ6 771 aaKnown RBP7.59□□□□□ -1.19
MCF2-205ENST00000437564 ZSCAN16Q9H4T2 348 aaPredicted RBP7.59□□□□□ -1.19
MCF2-205ENST00000437564 INCENPQ9NQS7 918 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 BARX2Q9UMQ3 279 aaPredicted RBP7.59□□□□□ -1.19
MCF2-205ENST00000437564 RABL2BQ9UNT1 228 aa7.59□□□□□ -1.19
MCF2-205ENST00000437564 IQSEC3Q9UPP2 1182 aaPredicted RBP7.59□□□□□ -1.19
MCF2-205ENST00000437564 ROCK2O75116 1388 aaKnown RBP7.59□□□□□ -1.19
MCF2-205ENST00000437564 A0A087WUV0 522 aaPredicted RBP7.59□□□□□ -1.2
MCF2-205ENST00000437564 EIF3CLB5ME19 914 aaKnown RBP7.59□□□□□ -1.2
MCF2-205ENST00000437564 ATP8B1O43520 1251 aa7.59□□□□□ -1.2
MCF2-205ENST00000437564 KRT38O76015 456 aa7.59□□□□□ -1.2
MCF2-205ENST00000437564 U2AF1L5P0DN76 240 aaPredicted RBP7.59□□□□□ -1.2
MCF2-205ENST00000437564 U2AF1Q01081 240 aaKnown RBP eCLIP7.59□□□□□ -1.2
MCF2-205ENST00000437564 ASTLQ6HA08 431 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms