RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SLC39A7Q92504 469 aa9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 TSPYL4Q9UJ04 414 aa9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 PKD1L3Q7Z443 1732 aa9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 TNS2Q63HR2 1409 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 BTBD11A6QL63 1104 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 ERVV-2B6SEH9 535 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 KCNQ3O43525 872 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 KRT24Q2M2I5 525 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 TSPYL6Q8N831 410 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 NFATC2IPQ8NCF5 419 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 COLQQ9Y215 455 aaPredicted RBP9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 SUPT16HQ9Y5B9 1047 aaKnown RBP9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 LRRC37A3O60309 1634 aa9.09□□□□□ -0.95
LSM3P3-201ENST00000436601 PARP4Q9UKK3 1724 aaKnown RBP9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 GLI3P10071 1580 aa9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 ADAMTS7Q9UKP4 1686 aa9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 VAMP4O75379 141 aa9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 CABP4P57796 275 aa9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 ZNF772Q68DY9 489 aaPredicted RBP9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 C3orf67Q6ZVT6 689 aa9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 RGS17Q9UGC6 210 aaPredicted RBP9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.08□□□□□ -0.96
LSM3P3-201ENST00000436601 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 ELL2O00472 640 aaPredicted RBP9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 CT47B1P0C2W7 299 aaPredicted RBP9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 C7P10643 843 aa9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 CLCN1P35523 988 aa9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 RARSP54136 660 aaKnown RBP9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 SEPT12Q8IYM1 358 aa9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 DCBLD2Q96PD2 775 aa9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 MRC1P22897 1456 aa9.07□□□□□ -0.96
LSM3P3-201ENST00000436601 A0A0G2JS52 829 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 MAP3K7O43318 606 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 BCAR3O75815 825 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 GABBR2O75899 941 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 MS4A1P11836 297 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 MYT1Q01538 1121 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 SLC39A6Q13433 755 aa9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 TWISTNBQ3B726 338 aaPredicted RBP9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
LSM3P3-201ENST00000436601 DLG5Q8TDM6 1919 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 HEG1Q9ULI3 1381 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 RBM6P78332 1123 aaKnown RBP9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 SH3D19Q5HYK7 790 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 PIGBQ92521 554 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 GPCPD1Q9NPB8 672 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 TMOD3Q9NYL9 352 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 SHANK3Q9BYB0 1731 aa9.05□□□□□ -0.96
LSM3P3-201ENST00000436601 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 POTEAQ6S8J7 498 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 FBXW7Q969H0 707 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 ZNF428Q96B54 188 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 BCL2L13Q9BXK5 485 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 BCL9O00512 1426 aa9.04□□□□□ -0.96
LSM3P3-201ENST00000436601 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 TCERG1O14776 1098 aaKnown RBP9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 KCNQ2O43526 872 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 PLIN1O60240 522 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 GIGYF1O75420 1035 aaPredicted RBP9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 RXRBP28702 533 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 RRP1P56182 461 aaKnown RBP9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 ALDH1L2Q3SY69 923 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 FAM182BQ5T319 152 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 ACSBG1Q96GR2 724 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 ZNF496Q96IT1 587 aaPredicted RBP9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 ATG3Q9NT62 314 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 ASAP1Q9ULH1 1129 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 WNK3Q9BYP7 1800 aa9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
LSM3P3-201ENST00000436601 POTEFA5A3E0 1075 aa9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 HOXB7P09629 217 aa9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 PTF1AQ7RTS3 328 aa9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 TTC5Q8N0Z6 440 aa9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 SYTL4Q96C24 671 aaPredicted RBP9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
LSM3P3-201ENST00000436601 KRT27Q7Z3Y8 459 aa9.01□□□□□ -0.97
LSM3P3-201ENST00000436601 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
LSM3P3-201ENST00000436601 SMC4Q9NTJ3 1288 aa9.01□□□□□ -0.97
LSM3P3-201ENST00000436601 TOGARAM1Q9Y4F4 1720 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 SCN11AQ9UI33 1791 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 PTCD1O75127 700 aaKnown RBP9□□□□□ -0.97
LSM3P3-201ENST00000436601 SNRPA1P09661 255 aaKnown RBP9□□□□□ -0.97
LSM3P3-201ENST00000436601 IRX6P78412 446 aaPredicted RBP9□□□□□ -0.97
LSM3P3-201ENST00000436601 C20orf194Q5TEA3 1177 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 NECTIN2Q92692 538 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 FRAT1Q92837 279 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms