RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 PPP4R3BQ5MIZ7 849 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 ZNF654Q8IZM8 581 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 TATDN2Q93075 761 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 CCDC85AQ96PX6 553 aaPredicted RBP7.62□□□□□ -1.19
VRK2-206ENST00000435505 SRPK1Q96SB4 655 aaKnown RBP7.62□□□□□ -1.19
VRK2-206ENST00000435505 CFHR5Q9BXR6 569 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 OCEL1Q9H607 264 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 TIAM1Q13009 1591 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 CCDC85CA6NKD9 419 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 ATP1A2P50993 1020 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 PGBD3Q8N328 593 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 FAM126AQ9BYI3 521 aaPredicted RBP7.62□□□□□ -1.19
VRK2-206ENST00000435505 ZNF408Q9H9D4 720 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 FANCLQ9NW38 375 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 NOD1Q9Y239 953 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 PCDHB9Q9Y5E1 797 aa7.62□□□□□ -1.19
VRK2-206ENST00000435505 NDUFB5O43674 189 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 FZD6O60353 706 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 NPR3P17342 541 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 PAK2Q13177 524 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 PLEKHG4Q58EX7 1191 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 GNL3LQ9NVN8 582 aaKnown RBP7.61□□□□□ -1.19
VRK2-206ENST00000435505 RCAN3Q9UKA8 241 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 PCDHGA4Q9Y5G9 962 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 PHLDB1Q86UU1 1377 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 MRE11P49959 708 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 C12orf49Q9H741 205 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 MYOM3Q5VTT5 1437 aa7.61□□□□□ -1.19
VRK2-206ENST00000435505 GIGYF1O75420 1035 aaPredicted RBP7.6□□□□□ -1.19
VRK2-206ENST00000435505 GJA8P48165 433 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 CLEC4GQ6UXB4 293 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 TRIM50Q86XT4 487 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 ANP32BQ92688 251 aaKnown RBP7.6□□□□□ -1.19
VRK2-206ENST00000435505 GRPEL1Q9HAV7 217 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 CHST12Q9NRB3 414 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 EID1Q9Y6B2 187 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 MRVI1Q9Y6F6 885 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 KDM2BQ8NHM5 1336 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 PNMA6FA0A0J9YX94 578 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 ZSCAN20P17040 1043 aaPredicted RBP7.6□□□□□ -1.19
VRK2-206ENST00000435505 WDR75Q8IWA0 830 aaKnown RBP7.6□□□□□ -1.19
VRK2-206ENST00000435505 CCAR1Q8IX12 1150 aaKnown RBP7.6□□□□□ -1.19
VRK2-206ENST00000435505 TRIM44Q96DX7 344 aaPredicted RBP7.6□□□□□ -1.19
VRK2-206ENST00000435505 CRBNQ96SW2 442 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 NIF3L1Q9GZT8 377 aa7.6□□□□□ -1.19
VRK2-206ENST00000435505 WDHD1O75717 1129 aaPredicted RBP7.59□□□□□ -1.19
VRK2-206ENST00000435505 FXR2P51116 673 aaKnown RBP eCLIP7.59□□□□□ -1.19
VRK2-206ENST00000435505 FERMT3Q86UX7 667 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 ANTXR1Q9H6X2 564 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 SNTG2Q9NY99 539 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 PCDHGA11Q9Y5H2 935 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 CCDC18Q5T9S5 1454 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 OFD1O75665 1012 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 FAM13AO94988 1023 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 KIF4AO95239 1232 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 MAMSTRQ6ZN01 415 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 CKAP2LQ8IYA6 745 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 CRELD1Q96HD1 420 aa7.59□□□□□ -1.19
VRK2-206ENST00000435505 PLIN1O60240 522 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
VRK2-206ENST00000435505 ATN1P54259 1190 aaPredicted RBP7.58□□□□□ -1.2
VRK2-206ENST00000435505 CNPY4Q8N129 248 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 SH3TC2Q8TF17 1288 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 GGT7Q9UJ14 662 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 DHX29Q7Z478 1369 aaKnown RBP7.58□□□□□ -1.2
VRK2-206ENST00000435505 USP19O94966 1318 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 ETFBP38117 255 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 GYS2P54840 703 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 LYPD8Q6UX82 237 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
VRK2-206ENST00000435505 JAMLQ86YT9 394 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 MPHOSPH6Q99547 160 aaKnown RBP7.58□□□□□ -1.2
VRK2-206ENST00000435505 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
VRK2-206ENST00000435505 ARHGAP35Q9NRY4 1499 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 ZBTB24O43167 697 aaPredicted RBP7.57□□□□□ -1.2
VRK2-206ENST00000435505 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
VRK2-206ENST00000435505 GNA15P30679 374 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 RASA3Q14644 834 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 FAM26DQ5JW98 314 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 ATCAYQ86WG3 371 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 IL17RAQ96F46 866 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 COPRSQ9NQ92 184 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
VRK2-206ENST00000435505 KIF7Q2M1P5 1343 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 UQCRHLA0A096LP55 91 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 ESYT3A0FGR9 886 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 CDC45O75419 566 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 UQCRHP07919 91 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 CDKN1CP49918 316 aaPredicted RBP7.57□□□□□ -1.2
VRK2-206ENST00000435505 MAP7D1Q3KQU3 841 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 MEI1Q5TIA1 1274 aa7.57□□□□□ -1.2
VRK2-206ENST00000435505 FTSJ3Q8IY81 847 aaKnown RBP7.57□□□□□ -1.2
VRK2-206ENST00000435505 R3HCC1Q9Y3T6 440 aaKnown RBP7.57□□□□□ -1.2
VRK2-206ENST00000435505 MCM4P33991 863 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 TERF1P54274 439 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 UBE4AQ14139 1066 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms