RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 RREB1Q92766 1687 aa13.13□□□□□ -0.31
LINC01055-201ENST00000435067 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
LINC01055-201ENST00000435067 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
LINC01055-201ENST00000435067 GNPATO15228 680 aa13.12□□□□□ -0.31
LINC01055-201ENST00000435067 RC3H1Q5TC82 1133 aaKnown RBP13.12□□□□□ -0.31
LINC01055-201ENST00000435067 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
LINC01055-201ENST00000435067 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
LINC01055-201ENST00000435067 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
LINC01055-201ENST00000435067 SRCIN1Q9C0H9 1055 aa13.12□□□□□ -0.31
LINC01055-201ENST00000435067 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
LINC01055-201ENST00000435067 ARFGEF2Q9Y6D5 1785 aa13.11□□□□□ -0.31
LINC01055-201ENST00000435067 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
LINC01055-201ENST00000435067 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
LINC01055-201ENST00000435067 MYD88Q99836 296 aa13.11□□□□□ -0.31
LINC01055-201ENST00000435067 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
LINC01055-201ENST00000435067 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
LINC01055-201ENST00000435067 C4BP0C0L5 1744 aa13.11□□□□□ -0.31
LINC01055-201ENST00000435067 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
LINC01055-201ENST00000435067 AK7Q96M32 723 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 COL15A1P39059 1388 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 ATP5J2-PTCD1G3V325 749 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
LINC01055-201ENST00000435067 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 MEIS3Q99687 375 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
LINC01055-201ENST00000435067 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
LINC01055-201ENST00000435067 ATP10DQ9P241 1426 aa13.09□□□□□ -0.31
LINC01055-201ENST00000435067 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
LINC01055-201ENST00000435067 HLFQ16534 295 aa13.09□□□□□ -0.31
LINC01055-201ENST00000435067 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
LINC01055-201ENST00000435067 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
LINC01055-201ENST00000435067 CHMP4BQ9H444 224 aaKnown RBP13.09□□□□□ -0.31
LINC01055-201ENST00000435067 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
LINC01055-201ENST00000435067 N4BP2Q86UW6 1770 aaPredicted RBP13.09□□□□□ -0.31
LINC01055-201ENST00000435067 PHF14O94880 888 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
LINC01055-201ENST00000435067 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
LINC01055-201ENST00000435067 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 ALDH1L1O75891 902 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 AAMPQ13685 434 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 DEFB132Q7Z7B7 95 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
LINC01055-201ENST00000435067 A0A087WZG4 1122 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 ERVV-1B6SEH8 477 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
LINC01055-201ENST00000435067 BAG6P46379 1132 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 TCIRG1Q13488 830 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
LINC01055-201ENST00000435067 PCDHB15Q9Y5E8 787 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
LINC01055-201ENST00000435067 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
LINC01055-201ENST00000435067 GCKRQ14397 625 aa13.06□□□□□ -0.32
LINC01055-201ENST00000435067 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
LINC01055-201ENST00000435067 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
LINC01055-201ENST00000435067 NUP98P52948 1817 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
LINC01055-201ENST00000435067 GNAI3P08754 354 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 UBTFL1P0CB47 393 aaPredicted RBP13.05□□□□□ -0.32
LINC01055-201ENST00000435067 KCNA4P22459 653 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 GPTP24298 496 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
LINC01055-201ENST00000435067 ZNF827Q17R98 1081 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 UBR3Q6ZT12 1888 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 ZPR1O75312 459 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 RFC4P35249 363 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 USPL1Q5W0Q7 1092 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
LINC01055-201ENST00000435067 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
LINC01055-201ENST00000435067 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
LINC01055-201ENST00000435067 GRM8O00222 908 aa13.04□□□□□ -0.32
LINC01055-201ENST00000435067 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
LINC01055-201ENST00000435067 RTL5Q5HYW3 569 aaPredicted RBP13.04□□□□□ -0.32
LINC01055-201ENST00000435067 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
LINC01055-201ENST00000435067 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
LINC01055-201ENST00000435067 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
LINC01055-201ENST00000435067 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
LINC01055-201ENST00000435067 GNAI2P04899 355 aa13.03□□□□□ -0.32
LINC01055-201ENST00000435067 SSFA2P28290 1259 aa13.03□□□□□ -0.32
LINC01055-201ENST00000435067 UBE3BQ7Z3V4 1068 aa13.03□□□□□ -0.32
LINC01055-201ENST00000435067 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
LINC01055-201ENST00000435067 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
LINC01055-201ENST00000435067 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
LINC01055-201ENST00000435067 C4AP0C0L4 1744 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 ADRA2BP18089 450 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.32
LINC01055-201ENST00000435067 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 NLRP10Q86W26 655 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.32
LINC01055-201ENST00000435067 IGHDP01880 384 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms