RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 WDR17Q8IZU2 1322 aa16.08■□□□□ 0.16
SCRN1-207ENST00000434476 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
SCRN1-207ENST00000434476 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.16
SCRN1-207ENST00000434476 COPS6Q7L5N1 327 aa16.08■□□□□ 0.16
SCRN1-207ENST00000434476 SUCLG2Q96I99 432 aa16.08■□□□□ 0.16
SCRN1-207ENST00000434476 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
SCRN1-207ENST00000434476 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
SCRN1-207ENST00000434476 LRP10Q7Z4F1 713 aa16.07■□□□□ 0.16
SCRN1-207ENST00000434476 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
SCRN1-207ENST00000434476 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
SCRN1-207ENST00000434476 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
SCRN1-207ENST00000434476 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
SCRN1-207ENST00000434476 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.162e-7■■■□□ 14.6
SCRN1-207ENST00000434476 GCKRQ14397 625 aa16.06■□□□□ 0.16
SCRN1-207ENST00000434476 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
SCRN1-207ENST00000434476 PRDM11Q9NQV5 511 aa16.06■□□□□ 0.16
SCRN1-207ENST00000434476 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
SCRN1-207ENST00000434476 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
SCRN1-207ENST00000434476 COL15A1P39059 1388 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 SGSM2O43147 1006 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 IFIT2P09913 472 aaKnown RBP16.05■□□□□ 0.16
SCRN1-207ENST00000434476 MYL6BP14649 208 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 NEK4P51957 841 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
SCRN1-207ENST00000434476 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
SCRN1-207ENST00000434476 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
SCRN1-207ENST00000434476 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
SCRN1-207ENST00000434476 GOLGA6L22H0YM25 854 aa16.04■□□□□ 0.16
SCRN1-207ENST00000434476 HSPA4P34932 840 aa16.04■□□□□ 0.16
SCRN1-207ENST00000434476 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
SCRN1-207ENST00000434476 PARP4Q9UKK3 1724 aaKnown RBP16.04■□□□□ 0.16
SCRN1-207ENST00000434476 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
SCRN1-207ENST00000434476 TOM1L2Q6ZVM7 507 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 MYD88Q99836 296 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
SCRN1-207ENST00000434476 C5P01031 1676 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 SSFA2P28290 1259 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 CUL4AQ13619 759 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 PLBD2Q8NHP8 589 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 EVI5LQ96CN4 794 aa16.03■□□□□ 0.16
SCRN1-207ENST00000434476 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
SCRN1-207ENST00000434476 SASH1O94885 1247 aa16.02■□□□□ 0.15
SCRN1-207ENST00000434476 KIAA1211Q6ZU35 1233 aa16.02■□□□□ 0.15
SCRN1-207ENST00000434476 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.15
SCRN1-207ENST00000434476 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
SCRN1-207ENST00000434476 RAD50Q92878 1312 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 FSD2A1L4K1 749 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 HIP1O00291 1037 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 BAG4O95429 457 aaKnown RBP16.01■□□□□ 0.15
SCRN1-207ENST00000434476 IL2RBP14784 551 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 AACSQ86V21 672 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 COPRSQ9NQ92 184 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 PALD1Q9ULE6 856 aa16.01■□□□□ 0.15
SCRN1-207ENST00000434476 STRCQ7RTU9 1775 aa16■□□□□ 0.15
SCRN1-207ENST00000434476 GOLGA6L3A6NEY3 463 aa16■□□□□ 0.15
SCRN1-207ENST00000434476 MAP4K4O95819 1239 aaPredicted RBP16■□□□□ 0.15
SCRN1-207ENST00000434476 RABL6Q3YEC7 729 aaPredicted RBP16■□□□□ 0.15
SCRN1-207ENST00000434476 TMX3Q96JJ7 454 aa16■□□□□ 0.15
SCRN1-207ENST00000434476 LSG1Q9H089 658 aaKnown RBP16■□□□□ 0.15
SCRN1-207ENST00000434476 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
SCRN1-207ENST00000434476 EAF2Q96CJ1 260 aaPredicted RBP15.98■□□□□ 0.15
SCRN1-207ENST00000434476 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
SCRN1-207ENST00000434476 KDM4FA0A1W2PPD8 638 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 EVA1CP58658 441 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 EPHA10Q5JZY3 1008 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 IL25Q9H293 177 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
SCRN1-207ENST00000434476 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
SCRN1-207ENST00000434476 ZGPATQ8N5A5 531 aaKnown RBP15.97■□□□□ 0.15
SCRN1-207ENST00000434476 KCNB2Q92953 911 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
SCRN1-207ENST00000434476 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 SNX14Q9Y5W7 946 aa15.97■□□□□ 0.15
SCRN1-207ENST00000434476 LAMB4A4D0S4 1761 aa15.96■□□□□ 0.15
SCRN1-207ENST00000434476 A0A087WZG4 1122 aa15.96■□□□□ 0.14
SCRN1-207ENST00000434476 NBPF26B4DH59 902 aa15.96■□□□□ 0.14
SCRN1-207ENST00000434476 H7C1W4 665 aa15.96■□□□□ 0.14
SCRN1-207ENST00000434476 CASP7P55210 303 aa15.96■□□□□ 0.14
SCRN1-207ENST00000434476 NBPF14Q5TI25 921 aa15.96■□□□□ 0.14
SCRN1-207ENST00000434476 NBPF10Q6P3W6 841 aaKnown RBP15.96■□□□□ 0.14
SCRN1-207ENST00000434476 NBPF15Q8N660 670 aa15.96■□□□□ 0.14
SCRN1-207ENST00000434476 GLI3P10071 1580 aa15.95■□□□□ 0.14
SCRN1-207ENST00000434476 MRE11P49959 708 aa15.95■□□□□ 0.14
SCRN1-207ENST00000434476 PTPN12Q05209 780 aaKnown RBP15.94■□□□□ 0.14
SCRN1-207ENST00000434476 KLHL40Q2TBA0 621 aa15.94■□□□□ 0.14
SCRN1-207ENST00000434476 UBE3BQ7Z3V4 1068 aa15.94■□□□□ 0.14
SCRN1-207ENST00000434476 TM6SF1Q9BZW5 370 aa15.94■□□□□ 0.14
SCRN1-207ENST00000434476 CCDC8Q9H0W5 538 aaPredicted RBP15.94■□□□□ 0.14
SCRN1-207ENST00000434476 BRPF3Q9ULD4 1205 aa15.94■□□□□ 0.14
SCRN1-207ENST00000434476 ZDHHC9Q9Y397 364 aa15.94■□□□□ 0.14
SCRN1-207ENST00000434476 AK9Q5TCS8 1911 aa15.94■□□□□ 0.14
SCRN1-207ENST00000434476 TNS2Q63HR2 1409 aa15.93■□□□□ 0.14
SCRN1-207ENST00000434476 ATP5JP18859 108 aa15.93■□□□□ 0.14
SCRN1-207ENST00000434476 TTC14Q96N46 770 aa15.93■□□□□ 0.14
SCRN1-207ENST00000434476 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
SCRN1-207ENST00000434476 SIL1Q9H173 461 aa15.93■□□□□ 0.14
SCRN1-207ENST00000434476 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
SCRN1-207ENST00000434476 KCPQ6ZWJ8 1503 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms