RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 AMOTL1Q8IY63 956 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 ARHGEF10LQ9HCE6 1279 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 RGPD8O14715 1765 aaPredicted RBP7.03□□□□□ -1.28
RFC3-202ENST00000434425 PPLO60437 1756 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.03□□□□□ -1.28
RFC3-202ENST00000434425 NAIPQ13075 1403 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 PRAG1Q86YV5 1406 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 PLEKHH1Q9ULM0 1364 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 FAM83GA6ND36 823 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 GYS2P54840 703 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 EGFLAMQ63HQ2 1017 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 TYW1BQ6NUM6 668 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 OTUD6BQ8N6M0 293 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 KCNB2Q92953 911 aa7.03□□□□□ -1.28
RFC3-202ENST00000434425 PPP1R1BQ9UD71 204 aaPredicted RBP7.03□□□□□ -1.28
RFC3-202ENST00000434425 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
RFC3-202ENST00000434425 UTRNP46939 3433 aa7.02□□□□□ -1.28
RFC3-202ENST00000434425 RAB3GAP2Q9H2M9 1393 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 GOLIM4O00461 696 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 VAMP1P23763 118 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 COPB2P35606 906 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 MDM2Q00987 491 aaPredicted RBP7.02□□□□□ -1.29
RFC3-202ENST00000434425 VPS72Q15906 364 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 HSP90AB2PQ58FF8 381 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 KRT27Q7Z3Y8 459 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 FEZ2Q9UHY8 353 aaPredicted RBP7.02□□□□□ -1.29
RFC3-202ENST00000434425 HDAC5Q9UQL6 1122 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 GNEQ9Y223 722 aaKnown RBP7.02□□□□□ -1.29
RFC3-202ENST00000434425 CDC42BPGQ6DT37 1551 aa7.02□□□□□ -1.29
RFC3-202ENST00000434425 CFAP69A5D8W1 941 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 NUDT7P0C024 238 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 IGBP1P78318 339 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 PTPROQ16827 1216 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 FAM182BQ5T319 152 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 C11orf96Q7Z7L8 435 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
RFC3-202ENST00000434425 MARVELD3Q96A59 401 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 BRINP2Q9C0B6 783 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 CHPF2Q9P2E5 772 aa7.01□□□□□ -1.29
RFC3-202ENST00000434425 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
RFC3-202ENST00000434425 ZNF500O60304 480 aaPredicted RBP7□□□□□ -1.29
RFC3-202ENST00000434425 NBPF9Q3BBW0 867 aa7□□□□□ -1.29
RFC3-202ENST00000434425 ARSIQ5FYB1 569 aa7□□□□□ -1.29
RFC3-202ENST00000434425 C6orf132Q5T0Z8 1188 aa7□□□□□ -1.29
RFC3-202ENST00000434425 PADI6Q6TGC4 694 aa7□□□□□ -1.29
RFC3-202ENST00000434425 EGFL6Q8IUX8 553 aa7□□□□□ -1.29
RFC3-202ENST00000434425 PBXIP1Q96AQ6 731 aa7□□□□□ -1.29
RFC3-202ENST00000434425 SCYL1Q96KG9 808 aa7□□□□□ -1.29
RFC3-202ENST00000434425 USP32Q8NFA0 1604 aa7□□□□□ -1.29
RFC3-202ENST00000434425 ABCC11Q96J66 1382 aa7□□□□□ -1.29
RFC3-202ENST00000434425 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
RFC3-202ENST00000434425 FAM98CQ17RN3 349 aaKnown RBP6.99□□□□□ -1.29
RFC3-202ENST00000434425 CARD10Q9BWT7 1032 aa6.99□□□□□ -1.29
RFC3-202ENST00000434425 ADAM33Q9BZ11 813 aa6.99□□□□□ -1.29
RFC3-202ENST00000434425 SWAP70Q9UH65 585 aa6.99□□□□□ -1.29
RFC3-202ENST00000434425 COG6Q9Y2V7 657 aa6.99□□□□□ -1.29
RFC3-202ENST00000434425 FMN2Q9NZ56 1722 aa6.99□□□□□ -1.29
RFC3-202ENST00000434425 LRP5O75197 1615 aa6.99□□□□□ -1.29
RFC3-202ENST00000434425 hCG_2014768A0A024R1R8 64 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 A0A0G2JS52 829 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 TLDC2A0PJX2 215 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 BAG6P46379 1132 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 HDAC1Q13547 482 aaPredicted RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 SAFB2Q14151 953 aaKnown RBP eCLIP6.98□□□□□ -1.29
RFC3-202ENST00000434425 ZKSCAN2Q63HK3 967 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 DDX46Q7L014 1031 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 ARMCX6Q7L4S7 300 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 MSL3Q8N5Y2 521 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 ZNF454Q8N9F8 522 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 PMFBP1Q8TBY8 1022 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 ANP32BQ92688 251 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 BTG4Q9NY30 223 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 CCDC144AA2RUR9 1427 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 TECPR2O15040 1411 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 PLCH1Q4KWH8 1693 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 NWD2Q9ULI1 1742 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 TNS3Q68CZ2 1445 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 YTHDC2Q9H6S0 1430 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 GOLGA6CA6NDK9 693 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 GOLGA6BA6NDN3 693 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 GOLGA6DP0CG33 693 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 POLD1P28340 1107 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 CLCN1P35523 988 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 R3HDM1Q15032 1099 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 METTL3Q86U44 580 aaKnown RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 TBC1D2Q9BYX2 928 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 GPCPD1Q9NPB8 672 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 GOLGA6AQ9NYA3 693 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 CEP126Q9P2H0 1117 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 FBXO9Q9UK97 447 aaPredicted RBP6.98□□□□□ -1.29
RFC3-202ENST00000434425 FRMD4BQ9Y2L6 1034 aa6.98□□□□□ -1.29
RFC3-202ENST00000434425 SPATA31E1Q6ZUB1 1445 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 KIF1AQ12756 1690 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 SNPHO15079 494 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 SCP2P22307 547 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms