RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
LINC00339-204ENST00000434233 RIC3Q7Z5B4 369 aa15.68■□□□□ 0.1
LINC00339-204ENST00000434233 ARXQ96QS3 562 aa15.68■□□□□ 0.1
LINC00339-204ENST00000434233 NARFQ9UHQ1 456 aa15.68■□□□□ 0.1
LINC00339-204ENST00000434233 TBC1D2BQ9UPU7 963 aa15.68■□□□□ 0.1
LINC00339-204ENST00000434233 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
LINC00339-204ENST00000434233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
LINC00339-204ENST00000434233 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
LINC00339-204ENST00000434233 RFC4P35249 363 aa15.67■□□□□ 0.1
LINC00339-204ENST00000434233 AMIGO3Q86WK7 504 aa15.67■□□□□ 0.1
LINC00339-204ENST00000434233 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
LINC00339-204ENST00000434233 ANO8Q9HCE9 1232 aaPredicted RBP15.67■□□□□ 0.1
LINC00339-204ENST00000434233 ZPR1O75312 459 aa15.66■□□□□ 0.1
LINC00339-204ENST00000434233 RRP1P56182 461 aaKnown RBP15.66■□□□□ 0.1
LINC00339-204ENST00000434233 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
LINC00339-204ENST00000434233 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
LINC00339-204ENST00000434233 DNAAF4Q8WXU2 420 aa15.66■□□□□ 0.1
LINC00339-204ENST00000434233 PLIN1O60240 522 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 PHF14O94880 888 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 TRIM27P14373 513 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 GIGYF2Q6Y7W6 1299 aaKnown RBP15.65■□□□□ 0.1
LINC00339-204ENST00000434233 COL23A1Q86Y22 540 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-204ENST00000434233 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-204ENST00000434233 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 QSER1Q2KHR3 1735 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 PNPLA7Q6ZV29 1317 aa15.65■□□□□ 0.1
LINC00339-204ENST00000434233 ADCY9O60503 1353 aa15.64■□□□□ 0.09
LINC00339-204ENST00000434233 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
LINC00339-204ENST00000434233 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
LINC00339-204ENST00000434233 HLFQ16534 295 aa15.64■□□□□ 0.09
LINC00339-204ENST00000434233 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
LINC00339-204ENST00000434233 ZBTB3Q9H5J0 574 aa15.64■□□□□ 0.09
LINC00339-204ENST00000434233 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
LINC00339-204ENST00000434233 F6X3S4 739 aa15.63■□□□□ 0.09
LINC00339-204ENST00000434233 USPL1Q5W0Q7 1092 aa15.63■□□□□ 0.09
LINC00339-204ENST00000434233 DZIP1LQ8IYY4 767 aaKnown RBP15.63■□□□□ 0.09
LINC00339-204ENST00000434233 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
LINC00339-204ENST00000434233 NUP98P52948 1817 aa15.63■□□□□ 0.09
LINC00339-204ENST00000434233 TUBGCP6Q96RT7 1819 aa15.62■□□□□ 0.09
LINC00339-204ENST00000434233 SOCS7O14512 581 aa15.62■□□□□ 0.09
LINC00339-204ENST00000434233 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
LINC00339-204ENST00000434233 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
LINC00339-204ENST00000434233 SRP68Q9UHB9 627 aaKnown RBP15.62■□□□□ 0.09
LINC00339-204ENST00000434233 ABCC4O15439 1325 aa15.62■□□□□ 0.09
LINC00339-204ENST00000434233 MSH5O43196 834 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 CCT4P50991 539 aaKnown RBP15.61■□□□□ 0.09
LINC00339-204ENST00000434233 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
LINC00339-204ENST00000434233 BEND3Q5T5X7 828 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
LINC00339-204ENST00000434233 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
LINC00339-204ENST00000434233 ZNF34Q8IZ26 560 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 LINS1Q8NG48 757 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 MYD88Q99836 296 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 TNNQ9UQP3 1299 aa15.61■□□□□ 0.09
LINC00339-204ENST00000434233 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 GYS1P13807 737 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
LINC00339-204ENST00000434233 BCORQ6W2J9 1755 aa15.59■□□□□ 0.09
LINC00339-204ENST00000434233 RLBP1P12271 317 aa15.59■□□□□ 0.09
LINC00339-204ENST00000434233 TMEM57Q8N5G2 664 aa15.59■□□□□ 0.09
LINC00339-204ENST00000434233 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
LINC00339-204ENST00000434233 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
LINC00339-204ENST00000434233 IGKV5-2P06315 115 aa15.58■□□□□ 0.08
LINC00339-204ENST00000434233 C20orf194Q5TEA3 1177 aa15.58■□□□□ 0.08
LINC00339-204ENST00000434233 CCDC191Q8NCU4 936 aa15.58■□□□□ 0.08
LINC00339-204ENST00000434233 PANK1Q8TE04 598 aa15.58■□□□□ 0.08
LINC00339-204ENST00000434233 IBTKQ9P2D0 1353 aaPredicted RBP15.58■□□□□ 0.08
LINC00339-204ENST00000434233 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 TM4SF1P30408 202 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 FKBP8Q14318 412 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
LINC00339-204ENST00000434233 PARP10Q53GL7 1025 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00339-204ENST00000434233 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
LINC00339-204ENST00000434233 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
LINC00339-204ENST00000434233 CWF19L2Q2TBE0 894 aaKnown RBP15.56■□□□□ 0.08
LINC00339-204ENST00000434233 NLRP10Q86W26 655 aa15.56■□□□□ 0.08
LINC00339-204ENST00000434233 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
LINC00339-204ENST00000434233 ANKRD36CQ5JPF3 1778 aa15.56■□□□□ 0.08
LINC00339-204ENST00000434233 GPTP24298 496 aa15.55■□□□□ 0.08
LINC00339-204ENST00000434233 GCKRQ14397 625 aa15.55■□□□□ 0.08
LINC00339-204ENST00000434233 NFIXQ14938 502 aa15.55■□□□□ 0.08
LINC00339-204ENST00000434233 PPP1R42Q7Z4L9 355 aa15.55■□□□□ 0.08
LINC00339-204ENST00000434233 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
LINC00339-204ENST00000434233 COG6Q9Y2V7 657 aa15.55■□□□□ 0.08
LINC00339-204ENST00000434233 BICDL1Q6ZP65 573 aa15.54■□□□□ 0.08
LINC00339-204ENST00000434233 ITPRIPQ8IWB1 547 aa15.54■□□□□ 0.08
LINC00339-204ENST00000434233 PDGFDQ9GZP0 370 aaPredicted RBP15.54■□□□□ 0.08
LINC00339-204ENST00000434233 USP44Q9H0E7 712 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms