RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 ITSN1Q15811 1721 aa9.59□□□□□ -0.87
GTF2A1-202ENST00000434192 CENPJQ9HC77 1338 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 FAM135BQ49AJ0 1406 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 PTPRUQ92729 1446 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 ST20-MTHFSA0A0A6YYL1 179 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 C11orf95C9JLR9 678 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 NR6A1Q15406 480 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 TMEM132EQ6IEE7 984 aa9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 HIRIP3Q9BW71 556 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-202ENST00000434192 AHDC1Q5TGY3 1603 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-202ENST00000434192 RFC5P40937 340 aa9.57□□□□□ -0.88
GTF2A1-202ENST00000434192 NNTQ13423 1086 aa9.57□□□□□ -0.88
GTF2A1-202ENST00000434192 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
GTF2A1-202ENST00000434192 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
GTF2A1-202ENST00000434192 ABCC11Q96J66 1382 aa9.57□□□□□ -0.88
GTF2A1-202ENST00000434192 FMN2Q9NZ56 1722 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 MARF1Q9Y4F3 1742 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 MSH6P52701 1360 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 CCDC7Q96M83 1385 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 MPNDQ8N594 471 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 DCCP43146 1447 aa9.56□□□□□ -0.88
GTF2A1-202ENST00000434192 CDC42BPGQ6DT37 1551 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 DISP3Q9P2K9 1392 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 PIP4K2BP78356 416 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 STK26Q9P289 416 aa9.55□□□□□ -0.88
GTF2A1-202ENST00000434192 ADH1CP00326 375 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 TMF1P82094 1093 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 PROSER2Q86WR7 435 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 TESK2Q96S53 571 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 HMX1Q9NP08 348 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 FKBPLQ9UIM3 349 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
GTF2A1-202ENST00000434192 ROBO2Q9HCK4 1378 aa9.53□□□□□ -0.88
GTF2A1-202ENST00000434192 BMP1P13497 986 aa9.53□□□□□ -0.88
GTF2A1-202ENST00000434192 HSPA1LP34931 641 aa9.53□□□□□ -0.88
GTF2A1-202ENST00000434192 PRAM1Q96QH2 718 aa9.53□□□□□ -0.88
GTF2A1-202ENST00000434192 ADGRL3Q9HAR2 1447 aa9.53□□□□□ -0.88
GTF2A1-202ENST00000434192 KIF1AQ12756 1690 aa9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 PRKCSHP14314 528 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 GPKOWQ92917 476 aaPredicted RBP eCLIP9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 POGKQ9P215 609 aa9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 AKAP12Q02952 1782 aa9.52□□□□□ -0.89
GTF2A1-202ENST00000434192 PLEKHH1Q9ULM0 1364 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 GRM5P41594 1212 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 PDXDC2PQ6P474 469 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 C1QTNF2Q9BXJ5 285 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 USP32Q8NFA0 1604 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 EVC2Q86UK5 1308 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 MON2Q7Z3U7 1717 aa9.51□□□□□ -0.89
GTF2A1-202ENST00000434192 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 NR3C2P08235 984 aa9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 VASH1Q7L8A9 365 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 ARHGAP9Q9BRR9 750 aa9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 SENP2Q9HC62 589 aa9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 AMOTL2Q9Y2J4 779 aa9.5□□□□□ -0.89
GTF2A1-202ENST00000434192 MST1RQ04912 1400 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 ATP7BP35670 1465 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 ANKRD26Q9UPS8 1709 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 TIMP2P16035 220 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 NR5A1Q13285 461 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 ERFEQ4G0M1 354 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 TRIM46Q7Z4K8 759 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 TRIM47Q96LD4 638 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 ATAD2Q6PL18 1390 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 COL22A1Q8NFW1 1626 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 NINLQ9Y2I6 1382 aa9.49□□□□□ -0.89
GTF2A1-202ENST00000434192 FSHRP23945 695 aa9.48□□□□□ -0.89
GTF2A1-202ENST00000434192 TMEM259Q4ZIN3 620 aa9.48□□□□□ -0.89
GTF2A1-202ENST00000434192 WAPLQ7Z5K2 1190 aa9.48□□□□□ -0.89
GTF2A1-202ENST00000434192 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
GTF2A1-202ENST00000434192 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
GTF2A1-202ENST00000434192 NRKQ7Z2Y5 1582 aa9.48□□□□□ -0.89
GTF2A1-202ENST00000434192 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-202ENST00000434192 DIEXFQ68CQ4 756 aaKnown RBP9.47□□□□□ -0.89
GTF2A1-202ENST00000434192 TRMT44Q8IYL2 757 aaKnown RBP9.47□□□□□ -0.89
GTF2A1-202ENST00000434192 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
GTF2A1-202ENST00000434192 KLF16Q9BXK1 252 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-202ENST00000434192 PTK2Q05397 1052 aa9.46□□□□□ -0.9
GTF2A1-202ENST00000434192 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms