RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 MCCP23508 829 aa20.71■□□□□ 0.91
CTSD-204ENST00000433655 BICC1Q9H694 974 aaKnown RBP20.71■□□□□ 0.91
CTSD-204ENST00000433655 CWC22Q9HCG8 908 aaKnown RBP20.71■□□□□ 0.91
CTSD-204ENST00000433655 AFDNP55196 1824 aaKnown RBP20.71■□□□□ 0.91
CTSD-204ENST00000433655 MYL6BP14649 208 aa20.7■□□□□ 0.9
CTSD-204ENST00000433655 OS9Q13438 667 aaPredicted RBP20.7■□□□□ 0.9
CTSD-204ENST00000433655 BRINP3Q76B58 766 aa20.7■□□□□ 0.9
CTSD-204ENST00000433655 XAGE3Q8WTP9 111 aa20.7■□□□□ 0.9
CTSD-204ENST00000433655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.7■□□□□ 0.9
CTSD-204ENST00000433655 ABCA3Q99758 1704 aa20.7■□□□□ 0.9
CTSD-204ENST00000433655 SGSM2O43147 1006 aa20.7■□□□□ 0.9
CTSD-204ENST00000433655 NUCB2P80303 420 aa20.7■□□□□ 0.9
CTSD-204ENST00000433655 HSPA4P34932 840 aa20.69■□□□□ 0.9
CTSD-204ENST00000433655 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
CTSD-204ENST00000433655 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
CTSD-204ENST00000433655 TMX3Q96JJ7 454 aa20.69■□□□□ 0.9
CTSD-204ENST00000433655 HDAC5Q9UQL6 1122 aa20.69■□□□□ 0.9
CTSD-204ENST00000433655 USP16Q9Y5T5 823 aa20.69■□□□□ 0.9
CTSD-204ENST00000433655 GOLGA6L3A6NEY3 463 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 LARP1Q6PKG0 1096 aaKnown RBP20.68■□□□□ 0.9
CTSD-204ENST00000433655 COPS6Q7L5N1 327 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 ZDHHC9Q9Y397 364 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 RAD50Q92878 1312 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 UBR2Q8IWV8 1755 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 GLRX3O76003 335 aaKnown RBP20.68■□□□□ 0.9
CTSD-204ENST00000433655 PTMSP20962 102 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 ERC1Q8IUD2 1116 aa20.68■□□□□ 0.9
CTSD-204ENST00000433655 CLASRPQ8N2M8 674 aaKnown RBP20.68■□□□□ 0.9
CTSD-204ENST00000433655 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
CTSD-204ENST00000433655 SASH1O94885 1247 aa20.67■□□□□ 0.9
CTSD-204ENST00000433655 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
CTSD-204ENST00000433655 XRCC6P12956 609 aaKnown RBP eCLIP20.67■□□□□ 0.9
CTSD-204ENST00000433655 LSG1Q9H089 658 aaKnown RBP20.67■□□□□ 0.9
CTSD-204ENST00000433655 CUL4AQ13619 759 aa20.66■□□□□ 0.9
CTSD-204ENST00000433655 METTL22Q9BUU2 404 aaPredicted RBP20.66■□□□□ 0.9
CTSD-204ENST00000433655 PIP4K2AP48426 406 aaPredicted RBP20.66■□□□□ 0.9
CTSD-204ENST00000433655 MCM2P49736 904 aa20.66■□□□□ 0.9
CTSD-204ENST00000433655 GCKRQ14397 625 aa20.66■□□□□ 0.9
CTSD-204ENST00000433655 SKOR2Q2VWA4 1001 aaPredicted RBP20.66■□□□□ 0.9
CTSD-204ENST00000433655 ECHDC1Q9NTX5 307 aa20.66■□□□□ 0.9
CTSD-204ENST00000433655 PAPPAQ13219 1627 aa20.65■□□□□ 0.9
CTSD-204ENST00000433655 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
CTSD-204ENST00000433655 FMNL2Q96PY5 1086 aa20.65■□□□□ 0.9
CTSD-204ENST00000433655 MYD88Q99836 296 aa20.65■□□□□ 0.9
CTSD-204ENST00000433655 TTC5Q8N0Z6 440 aa20.65■□□□□ 0.9
CTSD-204ENST00000433655 COL5A2P05997 1499 aaPredicted RBP20.64■□□□□ 0.9
CTSD-204ENST00000433655 UPF3BQ9BZI7 483 aaKnown RBP20.64■□□□□ 0.89
CTSD-204ENST00000433655 WDR17Q8IZU2 1322 aa20.64■□□□□ 0.89
CTSD-204ENST00000433655 NEXNQ0ZGT2 675 aa20.63■□□□□ 0.89
CTSD-204ENST00000433655 AACSQ86V21 672 aa20.63■□□□□ 0.89
CTSD-204ENST00000433655 EAF2Q96CJ1 260 aaPredicted RBP20.63■□□□□ 0.89
CTSD-204ENST00000433655 ARXQ96QS3 562 aa20.63■□□□□ 0.89
CTSD-204ENST00000433655 RTN4Q9NQC3 1192 aaKnown RBP20.63■□□□□ 0.89
CTSD-204ENST00000433655 SOS2Q07890 1332 aaPredicted RBP20.63■□□□□ 0.89
CTSD-204ENST00000433655 CABP4P57796 275 aa20.63■□□□□ 0.89
CTSD-204ENST00000433655 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
CTSD-204ENST00000433655 NUP188Q5SRE5 1749 aa20.63■□□□□ 0.89
CTSD-204ENST00000433655 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
CTSD-204ENST00000433655 CWC27Q6UX04 472 aaKnown RBP20.62■□□□□ 0.89
CTSD-204ENST00000433655 SNX14Q9Y5W7 946 aa20.62■□□□□ 0.89
CTSD-204ENST00000433655 KLHDC4Q8TBB5 520 aa20.61■□□□□ 0.89
CTSD-204ENST00000433655 KCPQ6ZWJ8 1503 aa20.61■□□□□ 0.89
CTSD-204ENST00000433655 KDM4FA0A1W2PPD8 638 aa20.61■□□□□ 0.89
CTSD-204ENST00000433655 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
CTSD-204ENST00000433655 PANK2Q9BZ23 570 aa20.61■□□□□ 0.89
CTSD-204ENST00000433655 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
CTSD-204ENST00000433655 G3BP1Q13283 466 aaKnown RBP eCLIP20.6■□□□□ 0.89
CTSD-204ENST00000433655 MCTP1Q6DN14 999 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 GAS2L3Q86XJ1 694 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 RASEFQ8IZ41 740 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 COL15A1P39059 1388 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 KLHL40Q2TBA0 621 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 NOL8Q76FK4 1167 aaKnown RBP20.6■□□□□ 0.89
CTSD-204ENST00000433655 INTS4Q96HW7 963 aaKnown RBP20.6■□□□□ 0.89
CTSD-204ENST00000433655 PRDM11Q9NQV5 511 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 LMBRD1Q9NUN5 540 aa20.6■□□□□ 0.89
CTSD-204ENST00000433655 TJP1Q07157 1748 aa20.59■□□□□ 0.89
CTSD-204ENST00000433655 SIL1Q9H173 461 aa20.59■□□□□ 0.89
CTSD-204ENST00000433655 PCDH11XQ9BZA7 1347 aa20.59■□□□□ 0.89
CTSD-204ENST00000433655 PCDH11YQ9BZA8 1340 aa20.59■□□□□ 0.89
CTSD-204ENST00000433655 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
CTSD-204ENST00000433655 MRE11P49959 708 aa20.58■□□□□ 0.89
CTSD-204ENST00000433655 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.89
CTSD-204ENST00000433655 EVI5LQ96CN4 794 aa20.58■□□□□ 0.89
CTSD-204ENST00000433655 TTC14Q96N46 770 aa20.58■□□□□ 0.89
CTSD-204ENST00000433655 CCDC8Q9H0W5 538 aaPredicted RBP20.58■□□□□ 0.89
CTSD-204ENST00000433655 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.89
CTSD-204ENST00000433655 GRPEL1Q9HAV7 217 aa20.58■□□□□ 0.88
CTSD-204ENST00000433655 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.88
CTSD-204ENST00000433655 TOGARAM1Q9Y4F4 1720 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 CASP7P55210 303 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 PTH1RQ03431 593 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 RABL6Q3YEC7 729 aaPredicted RBP20.57■□□□□ 0.88
CTSD-204ENST00000433655 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
CTSD-204ENST00000433655 TOM1L2Q6ZVM7 507 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms