RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 FRAT1Q92837 279 aaPredicted RBP19.6■□□□□ 0.73
CNOT9-205ENST00000433439 PDGFDQ9GZP0 370 aaPredicted RBP19.6■□□□□ 0.73
CNOT9-205ENST00000433439 USPL1Q5W0Q7 1092 aa19.59■□□□□ 0.73
CNOT9-205ENST00000433439 RIC3Q7Z5B4 369 aa19.59■□□□□ 0.73
CNOT9-205ENST00000433439 NARFQ9UHQ1 456 aa19.59■□□□□ 0.73
CNOT9-205ENST00000433439 C4AP0C0L4 1744 aa19.59■□□□□ 0.73
CNOT9-205ENST00000433439 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.72
CNOT9-205ENST00000433439 NOB1Q9ULX3 412 aaKnown RBP19.58■□□□□ 0.72
CNOT9-205ENST00000433439 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
CNOT9-205ENST00000433439 MSL1Q68DK7 614 aa19.57■□□□□ 0.72
CNOT9-205ENST00000433439 ANKRD13DQ6ZTN6 518 aa19.57■□□□□ 0.72
CNOT9-205ENST00000433439 CACNA1FO60840 1977 aa19.57■□□□□ 0.72
CNOT9-205ENST00000433439 USP42Q9H9J4 1324 aaKnown RBP19.56■□□□□ 0.72
CNOT9-205ENST00000433439 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
CNOT9-205ENST00000433439 HLFQ16534 295 aa19.56■□□□□ 0.72
CNOT9-205ENST00000433439 BICDL1Q6ZP65 573 aa19.56■□□□□ 0.72
CNOT9-205ENST00000433439 PLBD2Q8NHP8 589 aa19.56■□□□□ 0.72
CNOT9-205ENST00000433439 QSER1Q2KHR3 1735 aa19.56■□□□□ 0.72
CNOT9-205ENST00000433439 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
CNOT9-205ENST00000433439 PI4KAP2A4QPH2 592 aa19.55■□□□□ 0.72
CNOT9-205ENST00000433439 F6X3S4 739 aa19.55■□□□□ 0.72
CNOT9-205ENST00000433439 PI4KAP1Q8N8J0 262 aa19.55■□□□□ 0.72
CNOT9-205ENST00000433439 MAP3K2Q9Y2U5 619 aa19.55■□□□□ 0.72
CNOT9-205ENST00000433439 ZBTB7AO95365 584 aa19.54■□□□□ 0.72
CNOT9-205ENST00000433439 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
CNOT9-205ENST00000433439 ZNF652Q9Y2D9 606 aa19.54■□□□□ 0.72
CNOT9-205ENST00000433439 ERVV-1B6SEH8 477 aa19.53■□□□□ 0.72
CNOT9-205ENST00000433439 GYS1P13807 737 aa19.53■□□□□ 0.72
CNOT9-205ENST00000433439 FKBP8Q14318 412 aa19.53■□□□□ 0.72
CNOT9-205ENST00000433439 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
CNOT9-205ENST00000433439 BCL2L12Q9HB09 334 aa19.53■□□□□ 0.72
CNOT9-205ENST00000433439 PTPRCP08575 1304 aa19.52■□□□□ 0.72
CNOT9-205ENST00000433439 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CNOT9-205ENST00000433439 GPTP24298 496 aa19.52■□□□□ 0.72
CNOT9-205ENST00000433439 BRPF1P55201 1214 aaPredicted RBP19.52■□□□□ 0.72
CNOT9-205ENST00000433439 DNAAF4Q8WXU2 420 aa19.52■□□□□ 0.72
CNOT9-205ENST00000433439 MYD88Q99836 296 aa19.52■□□□□ 0.72
CNOT9-205ENST00000433439 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
CNOT9-205ENST00000433439 ADCY9O60503 1353 aa19.52■□□□□ 0.72
CNOT9-205ENST00000433439 SCN7AQ01118 1682 aa19.52■□□□□ 0.71
CNOT9-205ENST00000433439 BCORQ6W2J9 1755 aa19.52■□□□□ 0.71
CNOT9-205ENST00000433439 ATP5J2-PTCD1G3V325 749 aa19.51■□□□□ 0.71
CNOT9-205ENST00000433439 PLIN1O60240 522 aa19.51■□□□□ 0.71
CNOT9-205ENST00000433439 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
CNOT9-205ENST00000433439 ZKSCAN2Q63HK3 967 aa19.51■□□□□ 0.71
CNOT9-205ENST00000433439 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
CNOT9-205ENST00000433439 GIGYF2Q6Y7W6 1299 aaKnown RBP19.51■□□□□ 0.71
CNOT9-205ENST00000433439 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
CNOT9-205ENST00000433439 TNNQ9UQP3 1299 aa19.51■□□□□ 0.71
CNOT9-205ENST00000433439 ARFGEF2Q9Y6D5 1785 aa19.5■□□□□ 0.71
CNOT9-205ENST00000433439 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
CNOT9-205ENST00000433439 NLGN1Q8N2Q7 840 aa19.5■□□□□ 0.71
CNOT9-205ENST00000433439 SLC16A10Q8TF71 515 aa19.5■□□□□ 0.71
CNOT9-205ENST00000433439 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
CNOT9-205ENST00000433439 NIP7Q9Y221 180 aaKnown RBP eCLIP19.5■□□□□ 0.71
CNOT9-205ENST00000433439 NUP98P52948 1817 aa19.49■□□□□ 0.71
CNOT9-205ENST00000433439 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
CNOT9-205ENST00000433439 TCIRG1Q13488 830 aa19.49■□□□□ 0.71
CNOT9-205ENST00000433439 HSP90AB3PQ58FF7 597 aa19.49■□□□□ 0.71
CNOT9-205ENST00000433439 CLEC4GQ6UXB4 293 aa19.49■□□□□ 0.71
CNOT9-205ENST00000433439 METTL22Q9BUU2 404 aaPredicted RBP19.49■□□□□ 0.71
CNOT9-205ENST00000433439 CASZ1Q86V15 1759 aa19.49■□□□□ 0.71
CNOT9-205ENST00000433439 NFIXQ14938 502 aa19.48■□□□□ 0.71
CNOT9-205ENST00000433439 ATF7IPQ6VMQ6 1270 aa19.48■□□□□ 0.71
CNOT9-205ENST00000433439 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
CNOT9-205ENST00000433439 TRIM27P14373 513 aa19.47■□□□□ 0.71
CNOT9-205ENST00000433439 ARHGAP45Q92619 1136 aa19.47■□□□□ 0.71
CNOT9-205ENST00000433439 SETDB2Q96T68 719 aa19.47■□□□□ 0.71
CNOT9-205ENST00000433439 MTFR1LQ9H019 292 aa19.47■□□□□ 0.71
CNOT9-205ENST00000433439 NPHP1O15259 732 aa19.46■□□□□ 0.71
CNOT9-205ENST00000433439 MMP10P09238 476 aa19.46■□□□□ 0.71
CNOT9-205ENST00000433439 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
CNOT9-205ENST00000433439 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
CNOT9-205ENST00000433439 SUPT16HQ9Y5B9 1047 aaKnown RBP19.46■□□□□ 0.71
CNOT9-205ENST00000433439 ZNF34Q8IZ26 560 aa19.45■□□□□ 0.7
CNOT9-205ENST00000433439 PARP3Q9Y6F1 533 aa19.45■□□□□ 0.7
CNOT9-205ENST00000433439 ATP10DQ9P241 1426 aa19.44■□□□□ 0.7
CNOT9-205ENST00000433439 RRP1P56182 461 aaKnown RBP19.44■□□□□ 0.7
CNOT9-205ENST00000433439 DZIP1LQ8IYY4 767 aaKnown RBP19.44■□□□□ 0.7
CNOT9-205ENST00000433439 ISCA1Q9BUE6 129 aa19.44■□□□□ 0.7
CNOT9-205ENST00000433439 UBN2Q6ZU65 1347 aa19.44■□□□□ 0.7
CNOT9-205ENST00000433439 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
CNOT9-205ENST00000433439 RGL2O15211 777 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 IGKV5-2P06315 115 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 POLD1P28340 1107 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 TM4SF1P30408 202 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 DDR1Q08345 913 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 RTL5Q5HYW3 569 aaPredicted RBP19.43■□□□□ 0.7
CNOT9-205ENST00000433439 BEND3Q5T5X7 828 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 SUSD4Q5VX71 490 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 NBPF5PQ86XG9 351 aaPredicted RBP19.43■□□□□ 0.7
CNOT9-205ENST00000433439 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 SRCIN1Q9C0H9 1055 aa19.43■□□□□ 0.7
CNOT9-205ENST00000433439 AFDNP55196 1824 aaKnown RBP19.42■□□□□ 0.7
CNOT9-205ENST00000433439 NEURL1BA8MQ27 555 aa19.42■□□□□ 0.7
CNOT9-205ENST00000433439 SERPINB2P05120 415 aa19.42■□□□□ 0.7
CNOT9-205ENST00000433439 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
CNOT9-205ENST00000433439 PARP10Q53GL7 1025 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms