RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 MAP3K15Q6ZN16 1313 aa23.68■■□□□ 1.38
RFTN1-202ENST00000431547 CT47B1P0C2W7 299 aaPredicted RBP23.68■■□□□ 1.38
RFTN1-202ENST00000431547 POLD1P28340 1107 aa23.68■■□□□ 1.38
RFTN1-202ENST00000431547 ZNF428Q96B54 188 aa23.68■■□□□ 1.38
RFTN1-202ENST00000431547 TCERG1O14776 1098 aaKnown RBP23.67■■□□□ 1.38
RFTN1-202ENST00000431547 SLC4A2P04920 1241 aa23.67■■□□□ 1.38
RFTN1-202ENST00000431547 TM4SF1P30408 202 aa23.67■■□□□ 1.38
RFTN1-202ENST00000431547 ZNF652Q9Y2D9 606 aa23.67■■□□□ 1.38
RFTN1-202ENST00000431547 AIMP1Q12904 312 aaKnown RBP23.66■■□□□ 1.38
RFTN1-202ENST00000431547 MMP10P09238 476 aa23.65■■□□□ 1.38
RFTN1-202ENST00000431547 PHAXQ9H814 394 aaKnown RBP23.65■■□□□ 1.38
RFTN1-202ENST00000431547 NFIXQ14938 502 aa23.64■■□□□ 1.37
RFTN1-202ENST00000431547 HLFQ16534 295 aa23.64■■□□□ 1.37
RFTN1-202ENST00000431547 ANKRD13DQ6ZTN6 518 aa23.64■■□□□ 1.37
RFTN1-202ENST00000431547 ZBTB3Q9H5J0 574 aa23.64■■□□□ 1.37
RFTN1-202ENST00000431547 TBC1D9BQ66K14 1250 aa23.63■■□□□ 1.37
RFTN1-202ENST00000431547 PLBD2Q8NHP8 589 aa23.63■■□□□ 1.37
RFTN1-202ENST00000431547 COL24A1Q17RW2 1714 aa23.62■■□□□ 1.37
RFTN1-202ENST00000431547 GIGYF2Q6Y7W6 1299 aaKnown RBP23.62■■□□□ 1.37
RFTN1-202ENST00000431547 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
RFTN1-202ENST00000431547 G2E3Q7L622 706 aa23.61■■□□□ 1.37
RFTN1-202ENST00000431547 POLRMTO00411 1230 aaKnown RBP23.6■■□□□ 1.37
RFTN1-202ENST00000431547 DDX58O95786 925 aaKnown RBP23.6■■□□□ 1.37
RFTN1-202ENST00000431547 DDR1Q08345 913 aa23.6■■□□□ 1.37
RFTN1-202ENST00000431547 ALDH1L2Q3SY69 923 aa23.6■■□□□ 1.37
RFTN1-202ENST00000431547 BICDL1Q6ZP65 573 aa23.6■■□□□ 1.37
RFTN1-202ENST00000431547 SETDB2Q96T68 719 aa23.6■■□□□ 1.37
RFTN1-202ENST00000431547 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
RFTN1-202ENST00000431547 LRP5O75197 1615 aa23.59■■□□□ 1.37
RFTN1-202ENST00000431547 SSH1Q8WYL5 1049 aa23.59■■□□□ 1.37
RFTN1-202ENST00000431547 YTHDC1Q96MU7 727 aaKnown RBP23.59■■□□□ 1.37
RFTN1-202ENST00000431547 FLIIQ13045 1269 aa23.58■■□□□ 1.37
RFTN1-202ENST00000431547 HSP90AB3PQ58FF7 597 aa23.58■■□□□ 1.37
RFTN1-202ENST00000431547 ZNF34Q8IZ26 560 aa23.58■■□□□ 1.37
RFTN1-202ENST00000431547 PPP1R1BQ9UD71 204 aaPredicted RBP23.58■■□□□ 1.37
RFTN1-202ENST00000431547 NIP7Q9Y221 180 aaKnown RBP eCLIP23.58■■□□□ 1.37
RFTN1-202ENST00000431547 ATP10DQ9P241 1426 aa23.58■■□□□ 1.36
RFTN1-202ENST00000431547 KSR2Q6VAB6 950 aa23.57■■□□□ 1.36
RFTN1-202ENST00000431547 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
RFTN1-202ENST00000431547 MRPL50Q8N5N7 158 aaKnown RBP23.57■■□□□ 1.36
RFTN1-202ENST00000431547 CARMIL3Q8ND23 1372 aa23.56■■□□□ 1.36
RFTN1-202ENST00000431547 BCORQ6W2J9 1755 aa23.56■■□□□ 1.36
RFTN1-202ENST00000431547 SERPINB2P05120 415 aa23.56■■□□□ 1.36
RFTN1-202ENST00000431547 TCIRG1Q13488 830 aa23.56■■□□□ 1.36
RFTN1-202ENST00000431547 RARSP54136 660 aaKnown RBP23.55■■□□□ 1.36
RFTN1-202ENST00000431547 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
RFTN1-202ENST00000431547 BRPF1P55201 1214 aaPredicted RBP23.54■■□□□ 1.36
RFTN1-202ENST00000431547 FKBP5Q13451 457 aaPredicted RBP23.54■■□□□ 1.36
RFTN1-202ENST00000431547 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
RFTN1-202ENST00000431547 PARP10Q53GL7 1025 aa23.53■■□□□ 1.36
RFTN1-202ENST00000431547 SMC4Q9NTJ3 1288 aa23.53■■□□□ 1.36
RFTN1-202ENST00000431547 MAP3K2Q9Y2U5 619 aa23.53■■□□□ 1.36
RFTN1-202ENST00000431547 GPTP24298 496 aa23.52■■□□□ 1.36
RFTN1-202ENST00000431547 TRIM28Q13263 835 aaKnown RBP23.52■■□□□ 1.36
RFTN1-202ENST00000431547 ISCA1Q9BUE6 129 aa23.52■■□□□ 1.36
RFTN1-202ENST00000431547 METTL22Q9BUU2 404 aaPredicted RBP23.52■■□□□ 1.36
RFTN1-202ENST00000431547 BCL2L13Q9BXK5 485 aa23.52■■□□□ 1.36
RFTN1-202ENST00000431547 CD2APQ9Y5K6 639 aa23.52■■□□□ 1.36
RFTN1-202ENST00000431547 ADCY9O60503 1353 aa23.52■■□□□ 1.36
RFTN1-202ENST00000431547 TPTE2Q6XPS3 522 aa23.51■■□□□ 1.35
RFTN1-202ENST00000431547 NBPF5PQ86XG9 351 aaPredicted RBP23.51■■□□□ 1.35
RFTN1-202ENST00000431547 FHDC1Q9C0D6 1143 aaPredicted RBP23.51■■□□□ 1.35
RFTN1-202ENST00000431547 UBN2Q6ZU65 1347 aa23.51■■□□□ 1.35
RFTN1-202ENST00000431547 NLRP10Q86W26 655 aa23.5■■□□□ 1.35
RFTN1-202ENST00000431547 SUSD4Q5VX71 490 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 PRR5LQ6MZQ0 368 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 PPP1R42Q7Z4L9 355 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 CNBD1Q8NA66 436 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 MYD88Q99836 296 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 NYXQ9GZU5 481 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 PTPRCP08575 1304 aa23.49■■□□□ 1.35
RFTN1-202ENST00000431547 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
RFTN1-202ENST00000431547 DNAAF4Q8WXU2 420 aa23.48■■□□□ 1.35
RFTN1-202ENST00000431547 SYT17Q9BSW7 474 aa23.48■■□□□ 1.35
RFTN1-202ENST00000431547 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
RFTN1-202ENST00000431547 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
RFTN1-202ENST00000431547 NEXNQ0ZGT2 675 aa23.47■■□□□ 1.35
RFTN1-202ENST00000431547 C10orf71Q711Q0 1435 aa23.47■■□□□ 1.35
RFTN1-202ENST00000431547 NTSR2O95665 410 aa23.46■■□□□ 1.35
RFTN1-202ENST00000431547 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
RFTN1-202ENST00000431547 CCDC191Q8NCU4 936 aa23.46■■□□□ 1.35
RFTN1-202ENST00000431547 UTP14AQ9BVJ6 771 aaKnown RBP23.46■■□□□ 1.35
RFTN1-202ENST00000431547 NUP98P52948 1817 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 RNF123Q5XPI4 1314 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 F6X3S4 739 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 NPHP1O15259 732 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 BCAR3O75815 825 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 IGKV5-2P06315 115 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 TGFB2P61812 414 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 ST5P78524 1137 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 BRIP1Q9BX63 1249 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
RFTN1-202ENST00000431547 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
RFTN1-202ENST00000431547 KIF16BQ96L93 1317 aa23.44■■□□□ 1.34
RFTN1-202ENST00000431547 GTF2E1P29083 439 aaPredicted RBP23.44■■□□□ 1.34
RFTN1-202ENST00000431547 ARHGAP45Q92619 1136 aa23.44■■□□□ 1.34
RFTN1-202ENST00000431547 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
RFTN1-202ENST00000431547 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
RFTN1-202ENST00000431547 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
RFTN1-202ENST00000431547 ERFEQ4G0M1 354 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms