RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
LAMA4-208ENST00000431543 ELL2O00472 640 aaPredicted RBP18.49■□□□□ 0.55
LAMA4-208ENST00000431543 KCNA3P22001 575 aa18.49■□□□□ 0.55
LAMA4-208ENST00000431543 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
LAMA4-208ENST00000431543 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
LAMA4-208ENST00000431543 N4BP2Q86UW6 1770 aaPredicted RBP18.49■□□□□ 0.55
LAMA4-208ENST00000431543 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
LAMA4-208ENST00000431543 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
LAMA4-208ENST00000431543 TSR2Q969E8 191 aaKnown RBP18.48■□□□□ 0.55
LAMA4-208ENST00000431543 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
LAMA4-208ENST00000431543 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
LAMA4-208ENST00000431543 BCORQ6W2J9 1755 aa18.47■□□□□ 0.55
LAMA4-208ENST00000431543 CHRNA5P30532 468 aa18.47■□□□□ 0.55
LAMA4-208ENST00000431543 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
LAMA4-208ENST00000431543 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
LAMA4-208ENST00000431543 NRXN2Q9P2S2 1712 aa18.46■□□□□ 0.55
LAMA4-208ENST00000431543 CARMIL3Q8ND23 1372 aa18.46■□□□□ 0.55
LAMA4-208ENST00000431543 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
LAMA4-208ENST00000431543 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
LAMA4-208ENST00000431543 MAP3K15Q6ZN16 1313 aa18.46■□□□□ 0.55
LAMA4-208ENST00000431543 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
LAMA4-208ENST00000431543 HDGFL1Q5TGJ6 251 aa18.45■□□□□ 0.54
LAMA4-208ENST00000431543 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
LAMA4-208ENST00000431543 TSPYL6Q8N831 410 aa18.45■□□□□ 0.54
LAMA4-208ENST00000431543 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
LAMA4-208ENST00000431543 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
LAMA4-208ENST00000431543 ZNF652Q9Y2D9 606 aa18.45■□□□□ 0.54
LAMA4-208ENST00000431543 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
LAMA4-208ENST00000431543 ERVV-1B6SEH8 477 aa18.44■□□□□ 0.54
LAMA4-208ENST00000431543 HOXB7P09629 217 aa18.44■□□□□ 0.54
LAMA4-208ENST00000431543 AIMP1Q12904 312 aaKnown RBP18.44■□□□□ 0.54
LAMA4-208ENST00000431543 KIF6Q6ZMV9 814 aa18.44■□□□□ 0.54
LAMA4-208ENST00000431543 COPS6Q7L5N1 327 aa18.44■□□□□ 0.54
LAMA4-208ENST00000431543 XAGE3Q8WTP9 111 aa18.44■□□□□ 0.54
LAMA4-208ENST00000431543 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
LAMA4-208ENST00000431543 GRIN3BO60391 1043 aa18.42■□□□□ 0.54
LAMA4-208ENST00000431543 GPTP24298 496 aa18.42■□□□□ 0.54
LAMA4-208ENST00000431543 YY1P25490 414 aa18.42■□□□□ 0.54
LAMA4-208ENST00000431543 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
LAMA4-208ENST00000431543 IL16Q14005 1332 aa18.42■□□□□ 0.54
LAMA4-208ENST00000431543 E9PSI1 815 aa18.41■□□□□ 0.54
LAMA4-208ENST00000431543 RGL2O15211 777 aa18.41■□□□□ 0.54
LAMA4-208ENST00000431543 CENPBP07199 599 aaPredicted RBP18.41■□□□□ 0.54
LAMA4-208ENST00000431543 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
LAMA4-208ENST00000431543 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
LAMA4-208ENST00000431543 CNBD1Q8NA66 436 aa18.41■□□□□ 0.54
LAMA4-208ENST00000431543 BRIP1Q9BX63 1249 aa18.41■□□□□ 0.54
LAMA4-208ENST00000431543 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
LAMA4-208ENST00000431543 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
LAMA4-208ENST00000431543 NUP98P52948 1817 aa18.41■□□□□ 0.54
LAMA4-208ENST00000431543 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
LAMA4-208ENST00000431543 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
LAMA4-208ENST00000431543 NPHP1O15259 732 aa18.39■□□□□ 0.53
LAMA4-208ENST00000431543 ZNF34Q8IZ26 560 aa18.39■□□□□ 0.53
LAMA4-208ENST00000431543 UBN2Q6ZU65 1347 aa18.39■□□□□ 0.53
LAMA4-208ENST00000431543 ANKRD31Q8N7Z5 1873 aa18.39■□□□□ 0.53
LAMA4-208ENST00000431543 BRCA1P38398 1863 aaKnown RBP18.38■□□□□ 0.53
LAMA4-208ENST00000431543 TCERG1O14776 1098 aaKnown RBP18.38■□□□□ 0.53
LAMA4-208ENST00000431543 SUSD4Q5VX71 490 aa18.38■□□□□ 0.53
LAMA4-208ENST00000431543 TPTE2Q6XPS3 522 aa18.38■□□□□ 0.53
LAMA4-208ENST00000431543 PHAXQ9H814 394 aaKnown RBP18.38■□□□□ 0.53
LAMA4-208ENST00000431543 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
LAMA4-208ENST00000431543 FANCIQ9NVI1 1328 aa18.38■□□□□ 0.53
LAMA4-208ENST00000431543 H0YIN7 160 aa18.37■□□□□ 0.53
LAMA4-208ENST00000431543 ST5P78524 1137 aa18.37■□□□□ 0.53
LAMA4-208ENST00000431543 DALRD3Q5D0E6 543 aaKnown RBP18.37■□□□□ 0.53
LAMA4-208ENST00000431543 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
LAMA4-208ENST00000431543 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
LAMA4-208ENST00000431543 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
LAMA4-208ENST00000431543 ATP10DQ9P241 1426 aa18.37■□□□□ 0.53
LAMA4-208ENST00000431543 PDE6BP35913 854 aa18.36■□□□□ 0.53
LAMA4-208ENST00000431543 CHD4Q14839 1912 aa18.36■□□□□ 0.53
LAMA4-208ENST00000431543 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
LAMA4-208ENST00000431543 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
LAMA4-208ENST00000431543 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
LAMA4-208ENST00000431543 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
LAMA4-208ENST00000431543 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
LAMA4-208ENST00000431543 ANKRD13DQ6ZTN6 518 aa18.35■□□□□ 0.53
LAMA4-208ENST00000431543 ARHGAP27Q6ZUM4 889 aa18.35■□□□□ 0.53
LAMA4-208ENST00000431543 ZNF622Q969S3 477 aaKnown RBP eCLIP18.35■□□□□ 0.53
LAMA4-208ENST00000431543 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
LAMA4-208ENST00000431543 TCIRG1Q13488 830 aa18.34■□□□□ 0.53
LAMA4-208ENST00000431543 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
LAMA4-208ENST00000431543 PLBD2Q8NHP8 589 aa18.34■□□□□ 0.53
LAMA4-208ENST00000431543 NTSR2O95665 410 aa18.33■□□□□ 0.52
LAMA4-208ENST00000431543 SRGNP10124 158 aa18.33■□□□□ 0.52
LAMA4-208ENST00000431543 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
LAMA4-208ENST00000431543 ABCC12Q96J65 1359 aa18.32■□□□□ 0.52
LAMA4-208ENST00000431543 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
LAMA4-208ENST00000431543 VAMP4O75379 141 aa18.32■□□□□ 0.52
LAMA4-208ENST00000431543 CDCA7LQ96GN5 454 aa18.32■□□□□ 0.52
LAMA4-208ENST00000431543 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
LAMA4-208ENST00000431543 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
LAMA4-208ENST00000431543 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
LAMA4-208ENST00000431543 PARP10Q53GL7 1025 aa18.31■□□□□ 0.52
LAMA4-208ENST00000431543 G2E3Q7L622 706 aa18.31■□□□□ 0.52
LAMA4-208ENST00000431543 NLRP10Q86W26 655 aa18.31■□□□□ 0.52
LAMA4-208ENST00000431543 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
LAMA4-208ENST00000431543 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
LAMA4-208ENST00000431543 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms