RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 SUCLG2Q96I99 432 aa22.35■■□□□ 1.17
CHD1L-204ENST00000431239 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
CHD1L-204ENST00000431239 PTH1RQ03431 593 aa22.35■■□□□ 1.17
CHD1L-204ENST00000431239 PIP4K2AP48426 406 aaPredicted RBP22.34■■□□□ 1.17
CHD1L-204ENST00000431239 KLHDC4Q8TBB5 520 aa22.34■■□□□ 1.17
CHD1L-204ENST00000431239 PPP1R9BQ96SB3 815 aa22.34■■□□□ 1.17
CHD1L-204ENST00000431239 BICC1Q9H694 974 aaKnown RBP22.34■■□□□ 1.17
CHD1L-204ENST00000431239 GADD45BO75293 160 aaPredicted RBP22.34■■□□□ 1.17
CHD1L-204ENST00000431239 KRT28Q7Z3Y7 464 aa22.34■■□□□ 1.17
CHD1L-204ENST00000431239 DDX17Q92841 729 aaKnown RBP22.34■■□□□ 1.17
CHD1L-204ENST00000431239 ECHDC1Q9NTX5 307 aa22.34■■□□□ 1.17
CHD1L-204ENST00000431239 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
CHD1L-204ENST00000431239 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.17
CHD1L-204ENST00000431239 RUFY3Q7L099 469 aa22.33■■□□□ 1.17
CHD1L-204ENST00000431239 TTC41PQ6P2S7 1318 aa22.33■■□□□ 1.16
CHD1L-204ENST00000431239 GRM8O00222 908 aa22.33■■□□□ 1.16
CHD1L-204ENST00000431239 JARID2Q92833 1246 aaPredicted RBP22.33■■□□□ 1.16
CHD1L-204ENST00000431239 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.16
CHD1L-204ENST00000431239 ALDH1L1O75891 902 aa22.32■■□□□ 1.16
CHD1L-204ENST00000431239 MTX1Q13505 466 aa22.32■■□□□ 1.16
CHD1L-204ENST00000431239 ADCK5Q3MIX3 580 aa22.32■■□□□ 1.16
CHD1L-204ENST00000431239 LRSAM1Q6UWE0 723 aa22.32■■□□□ 1.16
CHD1L-204ENST00000431239 KAZALD1Q96I82 304 aa22.32■■□□□ 1.16
CHD1L-204ENST00000431239 TLR7Q9NYK1 1049 aaKnown RBP22.32■■□□□ 1.16
CHD1L-204ENST00000431239 LARGE1O95461 756 aa22.31■■□□□ 1.16
CHD1L-204ENST00000431239 RIC3Q7Z5B4 369 aa22.31■■□□□ 1.16
CHD1L-204ENST00000431239 TTC14Q96N46 770 aa22.31■■□□□ 1.16
CHD1L-204ENST00000431239 MBD3O95983 291 aa22.31■■□□□ 1.16
CHD1L-204ENST00000431239 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
CHD1L-204ENST00000431239 TCHHQ07283 1943 aa22.31■■□□□ 1.16
CHD1L-204ENST00000431239 PROSER2Q86WR7 435 aaPredicted RBP22.3■■□□□ 1.16
CHD1L-204ENST00000431239 IL17RAQ96F46 866 aa22.3■■□□□ 1.16
CHD1L-204ENST00000431239 GPATCH3Q96I76 525 aa22.3■■□□□ 1.16
CHD1L-204ENST00000431239 JAKMIP1Q96N16 626 aaKnown RBP22.3■■□□□ 1.16
CHD1L-204ENST00000431239 RPAP1Q9BWH6 1393 aaPredicted RBP22.3■■□□□ 1.16
CHD1L-204ENST00000431239 WDR33Q9C0J8 1336 aaKnown RBP22.3■■□□□ 1.16
CHD1L-204ENST00000431239 USP48Q86UV5 1035 aa22.3■■□□□ 1.16
CHD1L-204ENST00000431239 LINS1Q8NG48 757 aa22.3■■□□□ 1.16
CHD1L-204ENST00000431239 NCAPD2Q15021 1401 aa22.3■■□□□ 1.16
CHD1L-204ENST00000431239 FAM227BQ96M60 508 aa22.3■■□□□ 1.16
CHD1L-204ENST00000431239 SASH1O94885 1247 aa22.29■■□□□ 1.16
CHD1L-204ENST00000431239 EAF2Q96CJ1 260 aaPredicted RBP22.29■■□□□ 1.16
CHD1L-204ENST00000431239 RGPD5Q99666 1765 aa22.29■■□□□ 1.16
CHD1L-204ENST00000431239 ERBB3P21860 1342 aa22.29■■□□□ 1.16
CHD1L-204ENST00000431239 USP42Q9H9J4 1324 aaKnown RBP22.29■■□□□ 1.16
CHD1L-204ENST00000431239 NPHP4O75161 1426 aaPredicted RBP22.29■■□□□ 1.16
CHD1L-204ENST00000431239 NFATC2IPQ8NCF5 419 aa22.29■■□□□ 1.16
CHD1L-204ENST00000431239 RAPGEF4Q8WZA2 1011 aa22.29■■□□□ 1.16
CHD1L-204ENST00000431239 DDX21Q9NR30 783 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHD1L-204ENST00000431239 LIMCH1Q9UPQ0 1083 aa22.29■■□□□ 1.16
CHD1L-204ENST00000431239 DDX58O95786 925 aaKnown RBP22.28■■□□□ 1.16
CHD1L-204ENST00000431239 KCNJ4P48050 445 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 G3BP1Q13283 466 aaKnown RBP eCLIP22.28■■□□□ 1.162e-7■□□□□ 8.3
CHD1L-204ENST00000431239 PDIA6Q15084 440 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 CCDC83Q8IWF9 413 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 CNPY2Q9Y2B0 182 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 IGKV5-2P06315 115 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 ZNF790Q6PG37 636 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 RUFY2Q8WXA3 655 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 BOLA2Q9H3K6 86 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 HEG1Q9ULI3 1381 aa22.28■■□□□ 1.16
CHD1L-204ENST00000431239 ERC1Q8IUD2 1116 aa22.27■■□□□ 1.16
CHD1L-204ENST00000431239 PHRF1Q9P1Y6 1649 aaKnown RBP22.27■■□□□ 1.16
CHD1L-204ENST00000431239 EPB41L2O43491 1005 aaKnown RBP22.27■■□□□ 1.15
CHD1L-204ENST00000431239 ZSCAN30Q86W11 494 aa22.27■■□□□ 1.15
CHD1L-204ENST00000431239 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.15
CHD1L-204ENST00000431239 XAGE3Q8WTP9 111 aa22.27■■□□□ 1.15
CHD1L-204ENST00000431239 SMC3Q9UQE7 1217 aa22.27■■□□□ 1.15
CHD1L-204ENST00000431239 SLIT3O75094 1523 aa22.26■■□□□ 1.15
CHD1L-204ENST00000431239 COL9A3Q14050 684 aaPredicted RBP22.26■■□□□ 1.15
CHD1L-204ENST00000431239 SYT1P21579 422 aa22.26■■□□□ 1.15
CHD1L-204ENST00000431239 MSNP26038 577 aaKnown RBP22.26■■□□□ 1.15
CHD1L-204ENST00000431239 MYD88Q99836 296 aa22.26■■□□□ 1.15
CHD1L-204ENST00000431239 CSB-PGBD3P0DP91 1061 aa22.25■■□□□ 1.15
CHD1L-204ENST00000431239 NMIQ13287 307 aaPredicted RBP22.25■■□□□ 1.15
CHD1L-204ENST00000431239 COPS6Q7L5N1 327 aa22.25■■□□□ 1.15
CHD1L-204ENST00000431239 EVI5LQ96CN4 794 aa22.25■■□□□ 1.15
CHD1L-204ENST00000431239 TCEANC2Q96MN5 208 aa22.25■■□□□ 1.15
CHD1L-204ENST00000431239 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
CHD1L-204ENST00000431239 FIBPO43427 364 aa22.24■■□□□ 1.15
CHD1L-204ENST00000431239 EPHA10Q5JZY3 1008 aa22.24■■□□□ 1.15
CHD1L-204ENST00000431239 STX6O43752 255 aa22.24■■□□□ 1.15
CHD1L-204ENST00000431239 CHRNA2Q15822 529 aa22.24■■□□□ 1.15
CHD1L-204ENST00000431239 EDC3Q96F86 508 aaKnown RBP22.24■■□□□ 1.15
CHD1L-204ENST00000431239 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
CHD1L-204ENST00000431239 NECAB1Q8N987 351 aa22.24■■□□□ 1.15
CHD1L-204ENST00000431239 RBM8AQ9Y5S9 174 aaKnown RBP22.24■■□□□ 1.15
CHD1L-204ENST00000431239 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
CHD1L-204ENST00000431239 NEXNQ0ZGT2 675 aa22.23■■□□□ 1.15
CHD1L-204ENST00000431239 CCDC171Q6TFL3 1326 aa22.23■■□□□ 1.15
CHD1L-204ENST00000431239 NPHP3Q7Z494 1330 aa22.23■■□□□ 1.15
CHD1L-204ENST00000431239 FSD1Q9BTV5 496 aa22.23■■□□□ 1.15
CHD1L-204ENST00000431239 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
CHD1L-204ENST00000431239 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.23■■□□□ 1.15
CHD1L-204ENST00000431239 NDUFB9Q9Y6M9 179 aa22.23■■□□□ 1.15
CHD1L-204ENST00000431239 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
CHD1L-204ENST00000431239 A0A0D9SFI3 127 aa22.22■■□□□ 1.15
CHD1L-204ENST00000431239 GJB2P29033 226 aa22.22■■□□□ 1.15
CHD1L-204ENST00000431239 HDAC5Q9UQL6 1122 aa22.22■■□□□ 1.15
CHD1L-204ENST00000431239 CYP46A1Q9Y6A2 500 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms