RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
HOXC4-202ENST00000430889 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
HOXC4-202ENST00000430889 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 ANAPC15P60006 121 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 CLEC17AQ6ZS10 378 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 IL25Q9H293 177 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
HOXC4-202ENST00000430889 TJP1Q07157 1748 aa17.05■□□□□ 0.32
HOXC4-202ENST00000430889 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
HOXC4-202ENST00000430889 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
HOXC4-202ENST00000430889 GCKRQ14397 625 aa17.05■□□□□ 0.32
HOXC4-202ENST00000430889 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
HOXC4-202ENST00000430889 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
HOXC4-202ENST00000430889 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
HOXC4-202ENST00000430889 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 CABP4P57796 275 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 RIC3Q7Z5B4 369 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
HOXC4-202ENST00000430889 ST18O60284 1047 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
HOXC4-202ENST00000430889 MYL6BP14649 208 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
HOXC4-202ENST00000430889 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
HOXC4-202ENST00000430889 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
HOXC4-202ENST00000430889 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
HOXC4-202ENST00000430889 SASH1O94885 1247 aa17.03■□□□□ 0.32
HOXC4-202ENST00000430889 SGSM2O43147 1006 aa17.02■□□□□ 0.32
HOXC4-202ENST00000430889 GLRX3O76003 335 aaKnown RBP17.02■□□□□ 0.32
HOXC4-202ENST00000430889 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
HOXC4-202ENST00000430889 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
HOXC4-202ENST00000430889 MYD88Q99836 296 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
HOXC4-202ENST00000430889 IL2RBP14784 551 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 HSPA4P34932 840 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 CASP7P55210 303 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
HOXC4-202ENST00000430889 CNTROBQ8N137 903 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
HOXC4-202ENST00000430889 RAD50Q92878 1312 aa17■□□□□ 0.31
HOXC4-202ENST00000430889 NBPF26B4DH59 902 aa17■□□□□ 0.31
HOXC4-202ENST00000430889 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
HOXC4-202ENST00000430889 NBPF14Q5TI25 921 aa17■□□□□ 0.31
HOXC4-202ENST00000430889 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
HOXC4-202ENST00000430889 NBPF15Q8N660 670 aa17■□□□□ 0.31
HOXC4-202ENST00000430889 IL27Q8NEV9 243 aa17■□□□□ 0.31
HOXC4-202ENST00000430889 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
HOXC4-202ENST00000430889 TRAK2O60296 914 aa16.99■□□□□ 0.31
HOXC4-202ENST00000430889 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
HOXC4-202ENST00000430889 MCCP23508 829 aa16.99■□□□□ 0.31
HOXC4-202ENST00000430889 SSFA2P28290 1259 aa16.99■□□□□ 0.31
HOXC4-202ENST00000430889 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
HOXC4-202ENST00000430889 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
HOXC4-202ENST00000430889 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
HOXC4-202ENST00000430889 LSG1Q9H089 658 aaKnown RBP16.99■□□□□ 0.31
HOXC4-202ENST00000430889 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
HOXC4-202ENST00000430889 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
HOXC4-202ENST00000430889 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
HOXC4-202ENST00000430889 MCM2P49736 904 aa16.98■□□□□ 0.31
HOXC4-202ENST00000430889 CUL4AQ13619 759 aa16.98■□□□□ 0.31
HOXC4-202ENST00000430889 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
HOXC4-202ENST00000430889 ITGB4P16144 1822 aa16.98■□□□□ 0.31
HOXC4-202ENST00000430889 COL14A1Q05707 1796 aaKnown RBP16.98■□□□□ 0.31
HOXC4-202ENST00000430889 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
HOXC4-202ENST00000430889 EAF2Q96CJ1 260 aaPredicted RBP16.97■□□□□ 0.31
HOXC4-202ENST00000430889 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
HOXC4-202ENST00000430889 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
HOXC4-202ENST00000430889 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.31
HOXC4-202ENST00000430889 FSD2A1L4K1 749 aa16.96■□□□□ 0.31
HOXC4-202ENST00000430889 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
HOXC4-202ENST00000430889 NEK4P51957 841 aa16.96■□□□□ 0.31
HOXC4-202ENST00000430889 NUCB2P80303 420 aa16.96■□□□□ 0.31
HOXC4-202ENST00000430889 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
HOXC4-202ENST00000430889 AACSQ86V21 672 aa16.96■□□□□ 0.31
HOXC4-202ENST00000430889 ZGPATQ8N5A5 531 aaKnown RBP16.96■□□□□ 0.31
HOXC4-202ENST00000430889 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
HOXC4-202ENST00000430889 TMX3Q96JJ7 454 aa16.95■□□□□ 0.3
HOXC4-202ENST00000430889 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.95■□□□□ 0.3
HOXC4-202ENST00000430889 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
HOXC4-202ENST00000430889 LRP6O75581 1613 aa16.95■□□□□ 0.3
HOXC4-202ENST00000430889 AHDC1Q5TGY3 1603 aaPredicted RBP16.95■□□□□ 0.3
HOXC4-202ENST00000430889 PTMSP20962 102 aa16.94■□□□□ 0.3
HOXC4-202ENST00000430889 KCNB2Q92953 911 aa16.94■□□□□ 0.3
HOXC4-202ENST00000430889 H7C1W4 665 aa16.94■□□□□ 0.3
HOXC4-202ENST00000430889 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
HOXC4-202ENST00000430889 PTPN12Q05209 780 aaKnown RBP16.94■□□□□ 0.3
HOXC4-202ENST00000430889 EVI5LQ96CN4 794 aa16.94■□□□□ 0.3
HOXC4-202ENST00000430889 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
HOXC4-202ENST00000430889 PKP1Q13835 747 aa16.93■□□□□ 0.3
HOXC4-202ENST00000430889 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
HOXC4-202ENST00000430889 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms