RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 NPM2Q86SE8 214 aaKnown RBP21.54■■□□□ 1.04
PTPRA-206ENST00000430705 ZNF622Q969S3 477 aaKnown RBP eCLIP21.54■■□□□ 1.043e-6■□□□□ 8.1
PTPRA-206ENST00000430705 DICER1Q9UPY3 1922 aaKnown RBP21.54■■□□□ 1.04
PTPRA-206ENST00000430705 MAPK8IP3Q9UPT6 1336 aa21.54■■□□□ 1.04
PTPRA-206ENST00000430705 TOMM70O94826 608 aa21.53■■□□□ 1.04
PTPRA-206ENST00000430705 NEFMP07197 916 aa21.53■■□□□ 1.04
PTPRA-206ENST00000430705 SRGNP10124 158 aa21.53■■□□□ 1.04
PTPRA-206ENST00000430705 LMNB1P20700 586 aa21.53■■□□□ 1.04
PTPRA-206ENST00000430705 PNISRQ8TF01 805 aaKnown RBP21.53■■□□□ 1.04
PTPRA-206ENST00000430705 RGL2O15211 777 aa21.52■■□□□ 1.04
PTPRA-206ENST00000430705 C21orf2O43822 256 aa21.52■■□□□ 1.04
PTPRA-206ENST00000430705 ST5P78524 1137 aa21.52■■□□□ 1.04
PTPRA-206ENST00000430705 PDZRN3Q9UPQ7 1066 aa21.52■■□□□ 1.04
PTPRA-206ENST00000430705 MYBBP1AQ9BQG0 1328 aaKnown RBP21.52■■□□□ 1.03
PTPRA-206ENST00000430705 ZC3H4Q9UPT8 1303 aaKnown RBP21.52■■□□□ 1.03
PTPRA-206ENST00000430705 WDR90Q96KV7 1748 aa21.52■■□□□ 1.03
PTPRA-206ENST00000430705 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
PTPRA-206ENST00000430705 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
PTPRA-206ENST00000430705 ZNF652Q9Y2D9 606 aa21.51■■□□□ 1.03
PTPRA-206ENST00000430705 ABCC12Q96J65 1359 aa21.5■■□□□ 1.03
PTPRA-206ENST00000430705 STYK1Q6J9G0 422 aa21.5■■□□□ 1.03
PTPRA-206ENST00000430705 PRPF40BQ6NWY9 871 aaKnown RBP21.5■■□□□ 1.03
PTPRA-206ENST00000430705 TTLL7Q6ZT98 887 aa21.5■■□□□ 1.03
PTPRA-206ENST00000430705 NIP7Q9Y221 180 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTPRA-206ENST00000430705 KDM2BQ8NHM5 1336 aa21.5■■□□□ 1.03
PTPRA-206ENST00000430705 KLRG2A4D1S0 409 aaPredicted RBP21.49■■□□□ 1.03
PTPRA-206ENST00000430705 RRAGCQ9HB90 399 aa21.49■■□□□ 1.03
PTPRA-206ENST00000430705 TMPOP42166 694 aaKnown RBP21.48■■□□□ 1.03
PTPRA-206ENST00000430705 RIPK4P57078 832 aa21.48■■□□□ 1.03
PTPRA-206ENST00000430705 LRP10Q7Z4F1 713 aa21.48■■□□□ 1.03
PTPRA-206ENST00000430705 RBM46Q8TBY0 533 aaKnown RBP21.48■■□□□ 1.03
PTPRA-206ENST00000430705 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
PTPRA-206ENST00000430705 NPHP1O15259 732 aa21.47■■□□□ 1.03
PTPRA-206ENST00000430705 NGEFQ8N5V2 710 aa21.47■■□□□ 1.03
PTPRA-206ENST00000430705 MASTLQ96GX5 879 aa21.47■■□□□ 1.03
PTPRA-206ENST00000430705 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
PTPRA-206ENST00000430705 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
PTPRA-206ENST00000430705 LTBP3Q9NS15 1303 aa21.47■■□□□ 1.03
PTPRA-206ENST00000430705 FAM177BA6PVY3 158 aa21.46■■□□□ 1.03
PTPRA-206ENST00000430705 CCDC146Q8IYE0 955 aa21.46■■□□□ 1.03
PTPRA-206ENST00000430705 C7orf43Q8WVR3 580 aa21.46■■□□□ 1.03
PTPRA-206ENST00000430705 CNKSR1Q969H4 720 aa21.46■■□□□ 1.03
PTPRA-206ENST00000430705 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
PTPRA-206ENST00000430705 RRP7AQ9Y3A4 280 aaKnown RBP21.46■■□□□ 1.03
PTPRA-206ENST00000430705 SNED1Q8TER0 1413 aa21.46■■□□□ 1.03
PTPRA-206ENST00000430705 GLTPD2A6NH11 291 aa21.45■■□□□ 1.02
PTPRA-206ENST00000430705 MYL6BP14649 208 aa21.45■■□□□ 1.02
PTPRA-206ENST00000430705 PDIA6Q15084 440 aa21.45■■□□□ 1.02
PTPRA-206ENST00000430705 ERVV-1B6SEH8 477 aa21.44■■□□□ 1.02
PTPRA-206ENST00000430705 ANKRD36CQ5JPF3 1778 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 POTECB2RU33 542 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 NPR1P16066 1061 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 PROSER3Q2NL68 480 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 TPTE2Q6XPS3 522 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 TAOK3Q9H2K8 898 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 ZBTB3Q9H5J0 574 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 ERBB4Q15303 1308 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 IBTKQ9P2D0 1353 aaPredicted RBP21.43■■□□□ 1.02
PTPRA-206ENST00000430705 RIC1Q4ADV7 1423 aa21.43■■□□□ 1.02
PTPRA-206ENST00000430705 APLP1P51693 650 aa21.42■■□□□ 1.02
PTPRA-206ENST00000430705 NUTM1Q86Y26 1132 aa21.42■■□□□ 1.02
PTPRA-206ENST00000430705 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
PTPRA-206ENST00000430705 DNAJC5GQ8N7S2 189 aa21.41■■□□□ 1.02
PTPRA-206ENST00000430705 ANXA1P04083 346 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 GPTP24298 496 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 HTRA3P83110 453 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 FSTL1Q12841 308 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 KRT24Q2M2I5 525 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 CRY2Q49AN0 593 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 ERFEQ4G0M1 354 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 KIF6Q6ZMV9 814 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 SLC51AQ86UW1 340 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 C16orf71Q8IYS4 520 aaPredicted RBP21.4■■□□□ 1.02
PTPRA-206ENST00000430705 ZNF34Q8IZ26 560 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 BABAM1Q9NWV8 329 aa21.4■■□□□ 1.02
PTPRA-206ENST00000430705 NTSR2O95665 410 aa21.39■■□□□ 1.01
PTPRA-206ENST00000430705 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
PTPRA-206ENST00000430705 ADAMTS8Q9UP79 889 aa21.39■■□□□ 1.01
PTPRA-206ENST00000430705 COL4A5P29400 1685 aa21.38■■□□□ 1.01
PTPRA-206ENST00000430705 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
PTPRA-206ENST00000430705 NEUROD2Q15784 382 aa21.38■■□□□ 1.01
PTPRA-206ENST00000430705 SUSD4Q5VX71 490 aa21.38■■□□□ 1.01
PTPRA-206ENST00000430705 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
PTPRA-206ENST00000430705 LAMB2P55268 1798 aa21.38■■□□□ 1.01
PTPRA-206ENST00000430705 CHL1O00533 1208 aa21.37■■□□□ 1.01
PTPRA-206ENST00000430705 EIF2S2P20042 333 aaKnown RBP21.37■■□□□ 1.01
PTPRA-206ENST00000430705 CCDC93Q567U6 631 aa21.37■■□□□ 1.01
PTPRA-206ENST00000430705 SOGA3Q5TF21 947 aa21.37■■□□□ 1.01
PTPRA-206ENST00000430705 GIGYF2Q6Y7W6 1299 aaKnown RBP21.37■■□□□ 1.01
PTPRA-206ENST00000430705 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
PTPRA-206ENST00000430705 VEGFAP15692 232 aaPredicted RBP21.36■■□□□ 1.01
PTPRA-206ENST00000430705 NYXQ9GZU5 481 aa21.36■■□□□ 1.01
PTPRA-206ENST00000430705 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
PTPRA-206ENST00000430705 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
PTPRA-206ENST00000430705 SMC1BQ8NDV3 1235 aa21.35■■□□□ 1.01
PTPRA-206ENST00000430705 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
PTPRA-206ENST00000430705 PCNTO95613 3336 aa21.35■■□□□ 1.01
PTPRA-206ENST00000430705 DDNO94850 711 aaPredicted RBP21.33■■□□□ 1.01
PTPRA-206ENST00000430705 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms